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SCNpilot_expt_500_bf_scaffold_295

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_295_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

176..475
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00038089F6
Uncharacterized protein {ECO:0000313|EMBL:KGO91910.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
SCNpilot_expt_500_bf_scaffold_295_2
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(484..1134)
DNA (651bp) protein (217aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036D695D rbh
SCNpilot_expt_500_bf_scaffold_295_3
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1136..1528)
DNA (393bp) protein (131aa)
mrsB2; protein-methionine-S-oxide reductase MrsB2; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
methionine sulfoxide reductase B n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B6404E
Methionine sulfoxide reductase B {ECO:0000313|EMBL:KGO78628.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
SCNpilot_expt_500_bf_scaffold_295_4
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1533..2021)
DNA (489bp) protein (163aa)
mrsB1; protein-methionine-S-oxide reductase MrsB1; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Probable protein-methionine-S-oxide reductase MrsB1 n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0B2_FLAPJ
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:KGO89857.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
SCNpilot_expt_500_bf_scaffold_295_5
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2027..2905)
DNA (879bp) protein (293aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9W7_9FLAO rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KGO92801.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
alpha/beta hydrolase rbh
SCNpilot_expt_500_bf_scaffold_295_6
unknown

Not on your lists

3045..3140
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_295_7
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3146..3964
DNA (819bp) protein (273aa)
Possible Zn-dependent protease n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J676_9FLAO rbh
Possible Zn-dependent protease {ECO:0000313|EMBL:EAZ94775.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
M48 family metalloprotease rbh
SCNpilot_expt_500_bf_scaffold_295_8
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4047..5348
DNA (1302bp) protein (434aa)
MFS transporter permease n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B34911 rbh
MFS transporter permease {ECO:0000313|EMBL:KIX21778.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
major facilitator superfamily permease rbh
SCNpilot_expt_500_bf_scaffold_295_9
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5422..6303
DNA (882bp) protein (294aa)
PDK repeat-containing protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2Q1_OWEHD
PDK repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:ESU25920.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_500_bf_scaffold_295_10
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6492..8942
DNA (2451bp) protein (817aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
S16 family, ATP-dependent endopeptidase La n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SGF1_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_295_11
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9085..10104
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXB4_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU18657.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
porQ; hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_295_12
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10111..10806
DNA (696bp) protein (232aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000256|SAAS:SAAS00098295};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
cmk; cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] rbh
Cytidylate kinase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RVZ8_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_295_13
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10902..12200
DNA (1299bp) protein (433aa)
Major facilitator superfamily (MFS), H+ Symporter (NHS) family, nucleoside permease n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z1T9_FLABF rbh
nupG; major facilitator superfamily (MFS) permease; K11537 MFS transporter, NHS family, xanthosine permease rbh
Major facilitator superfamily (MFS), H+ Symporter (NHS) family, nucleoside permease {ECO:0000313|EMBL:CCB69877.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_expt_500_bf_scaffold_295_14
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


12429..14252
DNA (1824bp) protein (608aa)
30S ribosomal protein S1 n=1 Tax=Flavobacterium sp. F52 RepID=J1AB86_9FLAO rbh
30S ribosomal protein S1 {ECO:0000313|EMBL:EJF99288.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 rbh
SCNpilot_expt_500_bf_scaffold_295_15
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14401..14964
DNA (564bp) protein (188aa)
Beta-Ig-H3/fasciclin n=1 Tax=Flavobacterium sp. F52 RepID=J1KME7_9FLAO
Fasciclin {ECO:0000313|EMBL:KIA86809.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
beta-Ig-H3/fasciclin
SCNpilot_expt_500_bf_scaffold_295_16
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15188..15745
DNA (558bp) protein (186aa)
Beta-Ig-H3/fasciclin n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RW02_9FLAO rbh
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:ESU18663.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
beta-Ig-H3/fasciclin
SCNpilot_expt_500_bf_scaffold_295_17
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(15825..18248)
DNA (2424bp) protein (808aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] rbh
Phenylalanyl-tRNA synthetase beta subunit n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SFV0_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_295_18
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18487..20430
DNA (1944bp) protein (648aa)
Probable potassium transport system protein kup n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XV59_FLAIG rbh
kup; potassium transport system protein Kup; K03549 KUP system potassium uptake protein rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
SCNpilot_expt_500_bf_scaffold_295_19
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20652..21518)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003678F18 rbh
Membrane protein {ECO:0000313|EMBL:KGO91976.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein; K08994 putative membrane protein rbh
SCNpilot_expt_500_bf_scaffold_295_20
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21541..23646)
DNA (2106bp) protein (702aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] rbh
ATP-dependent DNA helicase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SDE3_9FLAO rbh
ATP-dependent DNA helicase {ECO:0000313|EMBL:ESU24678.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_500_bf_scaffold_295_21
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23804..25498
DNA (1695bp) protein (565aa)
Carbamoyltransferase; K00612 carbamoyltransferase [EC:2.1.3.-] rbh
Carbamoyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF47_FLUTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO80253.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
SCNpilot_expt_500_bf_scaffold_295_22
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25625..26311)
DNA (687bp) protein (229aa)
Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Flavobacterium sp. CF136 RepID=J2JJR5_9FLAO rbh
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:EJL61248.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
aspartyl/Asparaginyl beta-hydroxylase
SCNpilot_expt_500_bf_scaffold_295_23
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26316..26819)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2S7J5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL61247.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_295_24
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26946..29015
DNA (2070bp) protein (690aa)
M1 family metalloprotease; K01256 aminopeptidase N [EC:3.4.11.2] rbh
M1 family metalloprotease n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SJX9_9FLAO rbh
M1 family metalloprotease {ECO:0000313|EMBL:ESU24675.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_500_bf_scaffold_295_25
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29082..29984
DNA (903bp) protein (301aa)
Patatin n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FFS8_FLAJ1 rbh
patatin rbh
Patatin {ECO:0000313|EMBL:ABQ05948.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_295_26
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30018..30539)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2S7J2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA86795.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_295_27
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30749..32083
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S6Y2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO97151.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_295_28
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32192..34528
DNA (2337bp) protein (779aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA/RNA helicase, superfamily I n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RX14_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_295_29
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34657..35277
DNA (621bp) protein (207aa)
Translation factor n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S475_9FLAO rbh
Translation factor Sua5 {ECO:0000313|EMBL:KGO89878.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein rbh
SCNpilot_expt_500_bf_scaffold_295_30
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35491..36330)
DNA (840bp) protein (280aa)
cell envelope biogenesis protein OmpA n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4C781 rbh
Putative flagellar motor protein MotB {ECO:0000313|EMBL:EAZ94524.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
flagellar motor/chemotaxis (MotB)-related lipoprotein; K02557 chemotaxis protein MotB rbh
Displaying items 1-30 of 53 in total

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