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SCNpilot_expt_500_bf_scaffold_453

Search features with annotation key words

Displaying items 61-80 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_453_61
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(69222..69614)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRR7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIX20940.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
SCNpilot_expt_500_bf_scaffold_453_62
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69614..70012)
DNA (399bp) protein (133aa)
Transcription elongation factor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LZA7_GRAFK
Uncharacterized protein {ECO:0000313|EMBL:KIX20939.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
transcription elongation factor; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_expt_500_bf_scaffold_453_63
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70029..70901)
DNA (873bp) protein (291aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRR5_9FLAO
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
SCNpilot_expt_500_bf_scaffold_453_64
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70978..71286)
DNA (309bp) protein (103aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRR5_9FLAO
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
SCNpilot_expt_500_bf_scaffold_453_65
unknown

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comp(71291..71506)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_453_66
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(71675..73006)
DNA (1332bp) protein (444aa)
Type IV fimbriae expression regulatory protein PilR n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRR2_9FLAO rbh
Type IV fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:EIA08202.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
two-component response transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_453_67
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73010..74101)
DNA (1092bp) protein (364aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Sensory box sensor histidine kinase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRR1_9FLAO rbh
two-component system sensor histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_453_68
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74208..74801)
DNA (594bp) protein (198aa)
DNA polymerase III epsilon subunit-like 3'-5' exonuclease n=1 Tax=Flavobacterium sp. CF136 RepID=J3C6J6_9FLAO
Contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ14640.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
exonuclease
SCNpilot_expt_500_bf_scaffold_453_69
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(74805..76721)
DNA (1917bp) protein (639aa)
Putative signal-transduction protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S344_9FLAO rbh
Nucleotidyltransferase {ECO:0000313|EMBL:KIA86705.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein; K07182 CBS domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_453_70
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76802..77665)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037C3693 rbh
Transporter {ECO:0000313|EMBL:KGO82550.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_453_71
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

77818..78324
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036B797A
Uncharacterized protein {ECO:0000313|EMBL:KIA86706.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_453_72
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

78447..79346
DNA (900bp) protein (300aa)
molecular chaperone DnaJ n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6CDE3 rbh
DnaJ C terminal domain protein {ECO:0000313|EMBL:EXZ20025.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
putative chaperone; K05516 curved DNA-binding protein rbh
SCNpilot_expt_500_bf_scaffold_453_73
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79358..79645
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0U9_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04876.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_500_bf_scaffold_453_74
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(80237..80350)
DNA (114bp) protein (38aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN74506.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
SCNpilot_expt_500_bf_scaffold_453_75
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

80736..81143
DNA (408bp) protein (136aa)
Transcriptional regulator {ECO:0000313|EMBL:KGO11702.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
XRE family transcriptional regulator id=3702813 bin=GWF2_Bacteroidetes_42_66 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
SCNpilot_expt_500_bf_scaffold_453_76
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

81168..82337
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0Z0_FLABF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCB69538.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_expt_500_bf_scaffold_453_77
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

82339..83091
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0Z1_FLABF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCB69539.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_expt_500_bf_scaffold_453_78
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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83155..83802
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7L187_PECCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR04172.1}; TaxID=1218933 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum PCC21.;"
SCNpilot_expt_500_bf_scaffold_453_79
Enterobacter sp. DC4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83805..84761
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PCC21 RepID=J7KS66_PECCC
Uncharacterized protein {ECO:0000313|EMBL:EWG78126.1}; TaxID=1395580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. DC4.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_453_80
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

84782..85432
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EAA8
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying items 61-80 of 80 in total

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