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SCNpilot_expt_500_bf_scaffold_453

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_453_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(152..541)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C180_9FLAO
GxxExxY protein {ECO:0000313|EMBL:KGO94848.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_453_2
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(640..1590)
DNA (951bp) protein (317aa)
2OG-Fe(II) oxygenase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FG14_FLAJ1 rbh
2OG-Fe(II) oxygenase; K06892 rbh
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ABQ05861.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_453_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1606..3759
DNA (2154bp) protein (718aa)
bfmBA; 3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] rbh
dehydrogenase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B66549 rbh
Dehydrogenase {ECO:0000313|EMBL:KIA86685.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
SCNpilot_expt_500_bf_scaffold_453_4
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(3837..5150)
DNA (1314bp) protein (438aa)
Serine family D-Ala-D-Ala carboxypeptidase id=4323065 bin=GWF2_Bacteroidetes_41_61 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
penicillin-binding protein, beta-lactamase class C
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_expt_500_bf_scaffold_453_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5153..5749)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VTH1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57072.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_453_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5752..6084)
DNA (333bp) protein (111aa)
Transcriptional regulator, PadR family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G3G3_9SPHI
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EEI90168.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
transcriptional regulator, PadR-like family
SCNpilot_expt_500_bf_scaffold_453_7
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6402..7847
DNA (1446bp) protein (482aa)
hyaluronan synthase (EC:2.4.1.212); K00752 hyaluronan synthase [EC:2.4.1.212] rbh
Glycosyl transferase n=1 Tax=Flavobacterium sp. CF136 RepID=J3BYR5_9FLAO rbh
Glycosyl transferase {ECO:0000313|EMBL:EJL60866.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
SCNpilot_expt_500_bf_scaffold_453_8
unknown

Not on your lists

comp(7896..8258)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_453_9
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8277..8837)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037DA4DF
Uncharacterized protein {ECO:0000313|EMBL:KGO93208.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_453_10
unknown

Not on your lists

comp(8921..9367)
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_453_11
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9482..11230
DNA (1749bp) protein (583aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000344C55E rbh
Lipoprotein {ECO:0000313|EMBL:KGD67834.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_453_12
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11220..11846
DNA (627bp) protein (209aa)
M54 archaelysin family metalloprotease n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SKY4_9FLAO
M54 archaelysin family metalloprotease {ECO:0000313|EMBL:ESU27109.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
M54 archaelysin family metalloprotease precursor; K06974
SCNpilot_expt_500_bf_scaffold_453_13
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11949..14336)
DNA (2388bp) protein (796aa)
MscS Mechanosensitive ion channel n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FI89_FLAJ1 rbh
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KGO94658.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
mechanosensitive ion channel MscS rbh
SCNpilot_expt_500_bf_scaffold_453_14
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14387..14842)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SEJ9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EWH09663.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_453_15
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14887..15687)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WE74_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO79220.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_453_16
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15819..17915)
DNA (2097bp) protein (699aa)
alpha-glucosidase n=1 Tax=Flavobacterium rivuli RepID=UPI00036E5FE2 rbh
Alpha-glucosidase {ECO:0000313|EMBL:KGO87974.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
glycoside hydrolase rbh
SCNpilot_expt_500_bf_scaffold_453_17
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18681..19490
DNA (810bp) protein (270aa)
Heavy metal transport/detoxification protein id=4527464 bin=GWA2_Flavobacterium_35_26 species=Riemerella anatipestifer genus=Riemerella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
putative heavy metal transport (copper)/detoxification protein
Probable protein likely involved in heavy metal transport (Copper)/detoxification {ECO:0000313|EMBL:CCB68967.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_expt_500_bf_scaffold_453_18
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19502..21784
DNA (2283bp) protein (761aa)
Copper-resistance protein, CopA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8V8_9FLAO
Copper-resistance protein, CopA family {ECO:0000313|EMBL:EFK35869.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
multicopper oxidase type 3
SCNpilot_expt_500_bf_scaffold_453_19
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21838..22359)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003712C32
Thioredoxin {ECO:0000313|EMBL:KGO84530.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
thioredoxin H-type-like protein
SCNpilot_expt_500_bf_scaffold_453_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22555..23271
DNA (717bp) protein (239aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFK56106.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EFK56106.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VQQ5_9SPHI rbh
SCNpilot_expt_500_bf_scaffold_453_21
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23498..24247)
DNA (750bp) protein (250aa)
Maleate isomerase {ECO:0000256|HAMAP-Rule:MF_00943}; EC=5.2.1.1 {ECO:0000256|HAMAP-Rule:MF_00943};; Maleate cis-trans isomerase {ECO:0000256|HAMAP-Rule:MF_00943}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
Asp/Glu racemase family protein (EC:5.1.1.13 5.1.1.3); K01799 maleate isomerase [EC:5.2.1.1] rbh
Asp/Glu/hydantoin racemase family protein n=2 Tax=Flavobacterium RepID=V6SG19_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_453_22
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24328..25239)
DNA (912bp) protein (304aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLY2_9FLAO rbh
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase {ECO:0000313|EMBL:ESU27237.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
fumarylacetoacetate hydrolase family protein rbh
SCNpilot_expt_500_bf_scaffold_453_23
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25298..26410)
DNA (1113bp) protein (371aa)
gentisate 1,2-dioxygenase (EC:1.13.11.4); K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] rbh
Putative dioxygenase oxidoreductase protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFP4_9FLAO rbh
Putative dioxygenase oxidoreductase protein {ECO:0000313|EMBL:ESU25528.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
SCNpilot_expt_500_bf_scaffold_453_24
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26484..27092)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J7B1_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_500_bf_scaffold_453_25
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27172..28152)
DNA (981bp) protein (327aa)
nitrilase (EC:3.5.5.1); K01502 aliphatic nitrilase [EC:3.5.5.7] rbh
Putative nitrilase protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWC5_9FLAO rbh
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_500_bf_scaffold_453_26
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28340..28768)
DNA (429bp) protein (143aa)
thioesterase (EC:3.1.2.-); K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
Thioesterase superfamily protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXM9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIX20228.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
SCNpilot_expt_500_bf_scaffold_453_27
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28793..30373)
DNA (1581bp) protein (527aa)
putative ferredoxin-dependent glutamate synthase (EC:1.4.7.1) rbh
glutamate synthase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B61680 rbh
Glutamate synthase {ECO:0000313|EMBL:KGO81234.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
SCNpilot_expt_500_bf_scaffold_453_28
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30428..32041)
DNA (1614bp) protein (538aa)
Acetate--CoA ligase (EC:6.2.1.1); K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32] rbh
2-aminobenzoate-CoA ligase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B6E324 rbh
2-aminobenzoate-CoA ligase {ECO:0000313|EMBL:KGO83540.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
SCNpilot_expt_500_bf_scaffold_453_29
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32090..34387)
DNA (2298bp) protein (766aa)
bifunctional protein Monooxygenase/dehydrogenase; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] rbh
Benzoate-CoA ligase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SKX0_9FLAO rbh
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:KGO94773.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
SCNpilot_expt_500_bf_scaffold_453_30
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34455..35060)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLC2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU27229.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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