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SCNpilot_expt_500_bf_scaffold_453_13

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: comp(11949..14336)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FI89_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 779.0
  • Bit_score: 783
  • Evalue 2.40e-223
  • rbh
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KGO94658.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 781.0
  • Bit_score: 804
  • Evalue 1.80e-229
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 779.0
  • Bit_score: 783
  • Evalue 7.60e-224
  • rbh

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Taxonomy

Flavobacterium subsaxonicum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2388
ATGAGAAATAAAACTTTGTTTAAATCGTTTCCACACAACCCCACCCTACTCCTCCTGTTTGTTTTATTCCTTATGACAGGAAAGGTTACAGCACAGGAAAAAGAAAAAACAGCAACAAACCAACCAACCGACAGTAAAAACAAACCTTCTGTGTTTGCTGAAGATGAACTGGCTGCCAGCGACTATCTTGTTTCTATTGAAAGAGCAGGCGAAATGCTTGACAATGCTAAAAGTAAAGGTGCTTTGGATGCAGGAGTCTTGTTTCTTCTTGGAGAAATGCAACAGACAGAAAAAGCCTTAAAACTTATTGATTCAAATCTTGGAGCAAAAAATAACGGTAATGTCCGCAATCAGCAGATGTATGGCAAAATCCTGTTAGAACTGCAGCAAAAATTTGAAAACTATTGGACCAGGTTAAACGAAAGTGACGAAAGGATTGTCAAAATCCGGAAAGGAAATAAGGCCATTATAAATGATACAGTTTTTAGAAAACTTATCAAGGACAGCCTTCTTATCAAAGAATTCCGTCCACAGCTCAAAGAATTAAAAAATAAATGGGTTACAACAGATAGTCTTTTAAGAGCCAATATTGACTCGCTTAACAACTGGAAAAAAGGCATCGTCGAAAAAAGAATGTTGGTTTCAAAAGACCTTATCCTTGTTAACGAACGACTGAACAAATCCGGGGTTTCGCTTCTGGGCAATGAACATCCACATTTGTGGGACAGCAATGGTGACAATCAGCAGCAAATGCAAACCTATTTCCAGGAAAAATTCAATGCCGAACAAAAAGCATTTTCCTATTATTTCGGTTACAGCTTTGGCAGTACTTTTATGTTGCTGGTATTGGGTGGACTATTATTATGGTGGATTAGTTTTAACCTGAAATATTTAAAAAGAGTACATCAGATGGAATCGCTGGAAATTTTCCAATTCCGCTATCTGAATCAGGGAGCCATATTACCGGTTATCGTGTTAATACTTAATATAGCCATTGCCATTAACCTGTATGCTCCTGCCCTTTTTATTGAATTTACACACCTGATACTCCTGATTGTATTGACGATACTGTTCAAAAAAGTATGGTTACCAAAGGCTTTCCGAAACTGGCTTTTACTGGTTGCGCTATTTGTCATGTTCGGCTTTATGGACCTCTTTGTTGAAGTAAGCCGAATCCAGCGTTGTATTTTTATTCTGGTCAATCTTGCCAGCATCCGCTTCGGACTCGCTTATCTGAAAACCATACAGGAAGAAATGTATATCAAAGGCCTTTTAAAATATGCCAAAATCCTGTTCCTGACATTGAACATATTGGCCGTGTTTTTTAATGTATTTGGCCGTGTTTCCTTAGCACATACGCTAAGTCTGGCCGCTGTTATTGCATTGACACAGGTTATAGCCCTTTCCGTATTCCTAAAAATTATATTGGAGATGATAACGCTTCAAATTTATGCCATACGCATCCGCAGGGGAATTGTGAAAATTTTTGACTTCAGGAATCTTGAAAAAAACCTCAAAAAACCATTCATGCTTCTCATTGTTTATTTATGGATAATTGTCATTGCTTCCAATTTGAATCTTTCCAATATATTTTATGACTCCATCTCATCGCTGCTCACCACACAAAACAAAATAGGTAATTTCTCCTTTACGGTAGGTAATATATTGTTATTCCTGTTAATCGTCTGGATTGCCCATATCATCCAGAAATATGTGGCTTACTTTTTTGGTGAGATTGACGATGAAGACGAAGAAACCATCAACAAAAAACAGCACTCCAAATTATTGATTACACGGCTTCTGCTACTTATTTTAGGCTATCTGCTGGCCATTTCTGCCGCCGGAATTCCTTTGGATAAGATTACTATTGTTTTAGGAGCATTGGGTGTTGGAGTTGGTTTAGGATTGCAGAATATTGTCAACAATTTTGTGTCGGGTGTAATCCTGATTTTTGACAAGCCCATCCAGATTGGTGATGTGATTGATGTAGGCTCCCAATCCGGAAGAGTAAAAACCATAGGTTTGAGAACCACTAAAATTGATACTTCTAATGGTGCCGAAGTTATTGTTCCTAATGGAAACATTTTGTCGCAAAATATCGTCAATTGGACCTATACCAATAATTCCAAGTTAGTTGACATGAGTTTTACATTACAGGGAGAAATCTCTCAGGAACAAATAAAAGCAACAATTATTAGCTCTATCAAAGAGATTCCAACAATTTATTCTGAAAAAGAGCCCCGGCTTTTTTACAACTTTATTTCTGATACCAAATACCAGCTAAAAATTCAGTTCTGGTGCAATATCTATAGAACTGAAGCAGCCATTAGTGAAGCAAGAATCGTACTTTATGAAGAGTTTAAAAAACAAGGCGTTAGTTTTGAGTAA
PROTEIN sequence
Length: 796
MRNKTLFKSFPHNPTLLLLFVLFLMTGKVTAQEKEKTATNQPTDSKNKPSVFAEDELAASDYLVSIERAGEMLDNAKSKGALDAGVLFLLGEMQQTEKALKLIDSNLGAKNNGNVRNQQMYGKILLELQQKFENYWTRLNESDERIVKIRKGNKAIINDTVFRKLIKDSLLIKEFRPQLKELKNKWVTTDSLLRANIDSLNNWKKGIVEKRMLVSKDLILVNERLNKSGVSLLGNEHPHLWDSNGDNQQQMQTYFQEKFNAEQKAFSYYFGYSFGSTFMLLVLGGLLLWWISFNLKYLKRVHQMESLEIFQFRYLNQGAILPVIVLILNIAIAINLYAPALFIEFTHLILLIVLTILFKKVWLPKAFRNWLLLVALFVMFGFMDLFVEVSRIQRCIFILVNLASIRFGLAYLKTIQEEMYIKGLLKYAKILFLTLNILAVFFNVFGRVSLAHTLSLAAVIALTQVIALSVFLKIILEMITLQIYAIRIRRGIVKIFDFRNLEKNLKKPFMLLIVYLWIIVIASNLNLSNIFYDSISSLLTTQNKIGNFSFTVGNILLFLLIVWIAHIIQKYVAYFFGEIDDEDEETINKKQHSKLLITRLLLLILGYLLAISAAGIPLDKITIVLGALGVGVGLGLQNIVNNFVSGVILIFDKPIQIGDVIDVGSQSGRVKTIGLRTTKIDTSNGAEVIVPNGNILSQNIVNWTYTNNSKLVDMSFTLQGEISQEQIKATIISSIKEIPTIYSEKEPRLFYNFISDTKYQLKIQFWCNIYRTEAAISEARIVLYEEFKKQGVSFE*