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SCNpilot_expt_500_bf_scaffold_20_31

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: 26825..28132

Top 3 Functional Annotations

Value Algorithm Source
Probable ABC-type transport system, membrane fusion efflux protein component n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWQ9_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 430.0
  • Bit_score: 699
  • Evalue 2.50e-198
  • rbh
ABC transporter membrane fusion efflux protein similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 430.0
  • Bit_score: 699
  • Evalue 7.90e-199
  • rbh
Biotin attachment protein {ECO:0000313|EMBL:AIG31614.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 430.0
  • Bit_score: 699
  • Evalue 3.50e-198

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Taxonomy

Flavobacterium psychrophilum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1308
ATGCAGCACTTAAGTACAATAAAGCAATTGTCAGACAGGCCGCATTATAAGATATTGAAAAGGATAATCATCGGACTGTGCCTATTGGGTATAGTGTTGCTATTCCTTCCCTGGACACAAAATGTTTCCGGCAACGGGGCAGTCACAACACTAAAGCCAAATCAGCGTCCGCAGACCATCCATACTGCCATAGCAGGTAGAATCGAAAAATGGTATGTCCAGGAAGGAGATTTTGTAGAGAAAGGCGATACGATACTCTATATTTCAGAAATTAAAGAAGATTATTTTGATCCGAACCTGGTAAAAAATACCAAACAGCAGGTAGATGCAAAGAAAAGTGCCCTGCAGTCGTATGATGGTAAGGTAAAATCACTGGAATCTCAAATGAGCGCACTTTCGAAGGAGCAGAACCTAAAAATACAGCAGGCCACCAACAAAATCAGGCAGGCAGTTCTAAAGGTTAAAAGCGACAGCATTGATCTGGAGGCAGTCAAGACGCAGCTAAAAATTGCCAACACGCAATTTGACCGTTCTGTACAGCTCAATAAGGATGGCCTGAAGCCTCTTACTGATGTGGAAGAAAAACGCCTTAAACTCCAGGATGCCCAAGCCAAGATCATCACTCAGGAAAATAAATTGCTTACCGCAAGAAATGAGCTCATTAATGCGAAAGTCGAGATTGGAAGGATAACGGCAGAATACAATGAAAAAATTGCAAAGTCAAGCAGTGATAAATTTACAGCACTAAGCAGCCAGTATGATACAGAAGCTCAGGTATCAAAGCTCGAAAACCAATATGTCAATTACAGTATACGTAATGGCATGTATTATATAAAAGCACCCCAAAGTGGTTTTGTTAACCGTGCCTTACAATCAGGGATTGGCGAAACTATAAAAGAAGGTATGCCTGTTGTCAGTATAATGCCGGCAAGCTACGAAATTGCGGTTGAGACCTATGTTAAGCCTATTGATCTTCCCCTGCTTAAAAAAGGCGACAGAGTGCGGGTATGGTTCGACGGGTGGCCAACCATCGTTTTCTCCGGGTGGCCGGGTATGTCCTATGGTACATTTGGAGGCAGGATAGTTGCTATTGAAAATTTCATCAGTCCGAATGGCAAGTACAGAGTGCTGATCGCACCAGACAAAAATGAGGCTCCATGGCCAAAACAACTCAGCATTGGTGCCGGAGTACAGACTATAACCCTGCTTGATACCGTACCGATATGGTTTGAAATCTGGAGAACACTCAACGGATTTCCTCCTAATTATTACCAGCATTCCCAAAATCAGAATTCTAAAGAAAAATGA
PROTEIN sequence
Length: 436
MQHLSTIKQLSDRPHYKILKRIIIGLCLLGIVLLFLPWTQNVSGNGAVTTLKPNQRPQTIHTAIAGRIEKWYVQEGDFVEKGDTILYISEIKEDYFDPNLVKNTKQQVDAKKSALQSYDGKVKSLESQMSALSKEQNLKIQQATNKIRQAVLKVKSDSIDLEAVKTQLKIANTQFDRSVQLNKDGLKPLTDVEEKRLKLQDAQAKIITQENKLLTARNELINAKVEIGRITAEYNEKIAKSSSDKFTALSSQYDTEAQVSKLENQYVNYSIRNGMYYIKAPQSGFVNRALQSGIGETIKEGMPVVSIMPASYEIAVETYVKPIDLPLLKKGDRVRVWFDGWPTIVFSGWPGMSYGTFGGRIVAIENFISPNGKYRVLIAPDKNEAPWPKQLSIGAGVQTITLLDTVPIWFEIWRTLNGFPPNYYQHSQNQNSKEK*