ggKbase home page

SCNpilot_expt_500_bf_scaffold_232_34

Organism: SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: 42646..43431

Top 3 Functional Annotations

Value Algorithm Source
rRNA methyltransferase {ECO:0000313|EMBL:KIA85101.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 261.0
  • Bit_score: 431
  • Evalue 1.10e-117
SpoU rRNA methylase family protein id=4400884 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 262.0
  • Bit_score: 427
  • Evalue 8.40e-117
  • rbh
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 262.0
  • Bit_score: 421
  • Evalue 1.50e-115
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. AED → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 786
TTGAAACAAATCACTTCAGTTCAGAATCCATTTATCAAATCGCTGGTACTGCTTCAGGAAAAATCCAAAGCACGGAAACAGACCGGAACGTTTTTAATTGAAGGCCACAGAGAAATTGAATTGGCCCAAAAAGGCAGTTATGAAATAGAAACGATTTTATTTCTGCCTGAAATCATTTCCGAATACGACGCCAAAAAACTTTCCGGCTCTGCAGAATTGATTGAAATCAGCAAAGATGTATACCAGAAACTGGCCTACCGTGATACTACAGAAGGCATCTTGGCGGTAGCAAAATCAAAAAATCTTTCCCTTTCAGAATTGAATCTGGGCAAAAATCCATTGATTTTAATTGCTGAATCTCCTGAAAAGCCTGGAAATATTGGCGCTATGCTACGAACTGCCGATGCTGCAAAGCTGGATGCCGTAATCATTGCCAATCCAAAAAGCGATTTATACAATCCCAATATCGTACGTTCCAGCGTTGGATGCCTGTTTACAAACCAGATTGCAACGGGAACTACCGAAGAAATTATTGCTTTCTTAAAAGAAAAAAACATCAGTATTTATTGCGCTACCTTGCAGGATTCAACAGGCTATCATACTCAGAATTATACAACCCCAACCGCATTGGTTGTAGGAACGGAAGCCACAGGATTAACACAGGAATGGCGCGACAATTCAACTCAAAACATCATTATCCCAATGCAGGGAGCCATCGATTCGATGAATGTTTCTGTTGCAGCAGCCATCTTGATTTTTGAAGCAAAAAGACAAAGAGGATTTTAA
PROTEIN sequence
Length: 262
LKQITSVQNPFIKSLVLLQEKSKARKQTGTFLIEGHREIELAQKGSYEIETILFLPEIISEYDAKKLSGSAELIEISKDVYQKLAYRDTTEGILAVAKSKNLSLSELNLGKNPLILIAESPEKPGNIGAMLRTADAAKLDAVIIANPKSDLYNPNIVRSSVGCLFTNQIATGTTEEIIAFLKEKNISIYCATLQDSTGYHTQNYTTPTALVVGTEATGLTQEWRDNSTQNIIIPMQGAIDSMNVSVAAAILIFEAKRQRGF*