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SCNpilot_expt_500_bf_scaffold_27331

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_27331_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..238)
DNA (237bp) protein (79aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ24_9GAMM
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor
SCNpilot_expt_500_bf_scaffold_27331_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(416..937)
DNA (522bp) protein (174aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
uracil-DNA glycosylase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CE894
SCNpilot_expt_500_bf_scaffold_27331_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1120..1314)
DNA (195bp) protein (65aa)
histidine kinase n=1 Tax=Dyella japonica RepID=UPI00030DC112
Histidine kinase {ECO:0000313|EMBL:KGI78800.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
response regulator containing a CheY-like receiver domain and a GGDEF domain
Displaying 3 items

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