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SCNpilot_expt_500_bf_scaffold_985

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_985_1

Not on your lists

3..527
DNA (525bp) protein (175aa)
Putative DNA methyltransferase, Modification methylase id=2574780 bin=GWF1_Xanthomonadales_69_6 species=Cupriavidus sp. HMR-1 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DNA methyltransferase {ECO:0000313|EMBL:EQD69225.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA methyltransferase
SCNpilot_expt_500_bf_scaffold_985_2
unknown

Not on your lists

616..831
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_3
unknown

Not on your lists

928..1134
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_4
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1134..1625
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KKL7_SHEWM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA87234.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
SCNpilot_expt_500_bf_scaffold_985_5
unknown

Not on your lists

1661..1909
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_6
unknown

Not on your lists

2002..2679
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_7
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2771..3421
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE50388.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. vasculorum.;"
SCNpilot_expt_500_bf_scaffold_985_8
Shewanella putrefaciens, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3458..3658
DNA (201bp) protein (67aa)
Carbon storage regulator homolog n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=CSRA_SHESH
carbon storage regulator; K03563 carbon storage regulator
Carbon storage regulator homolog {ECO:0000255|HAMAP-Rule:MF_00167}; TaxID=319224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella putrefaciens (strain CN-32 / ATCC BAA-453).;"
SCNpilot_expt_500_bf_scaffold_985_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3731..4204)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE61_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89070.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_985_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4565..5698)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NN09_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89071.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_985_11
unknown

Not on your lists

comp(5890..7644)
DNA (1755bp) protein (585aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_12

Not on your lists

comp(7641..8702)
DNA (1062bp) protein (354aa)
ParB-like partition protein n=2 Tax=mine drainage metagenome RepID=T1A769_9ZZZZ
ParB-like partition protein {ECO:0000313|EMBL:EQD56511.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ParB-like partition protein
SCNpilot_expt_500_bf_scaffold_985_13

Not on your lists

comp(8699..10162)
DNA (1464bp) protein (488aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=mine drainage metagenome RepID=T1BRB2_9ZZZZ rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EQD56510.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cobyrinic acid ac-diamide synthase
SCNpilot_expt_500_bf_scaffold_985_14
unknown

Not on your lists

10511..10708
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_15
unknown

Not on your lists

10801..11466
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_16
unknown

Not on your lists

11463..11861
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_17
unknown

Not on your lists

11874..12206
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_18
unknown

Not on your lists

12206..12586
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12583..13449
DNA (867bp) protein (289aa)
S1/P1 Nuclease n=1 Tax=Rhodanobacter denitrificans RepID=M4NHE7_9GAMM
S1/P1 Nuclease
S1/P1 Nuclease {ECO:0000313|EMBL:AGG89068.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_985_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13452..14282
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAK6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96497.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_985_21
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14382..15176
DNA (795bp) protein (265aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
signal peptidase I (EC:3.4.21.89)
signal peptidase n=1 Tax=Dyella japonica RepID=UPI0003137C00
SCNpilot_expt_500_bf_scaffold_985_22
unknown

Not on your lists

15250..15441
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15453..16406
DNA (954bp) protein (318aa)
Recombination-associated protein RdgC n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Q0_9GAMM
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DNA recombination-dependent growth factor C
SCNpilot_expt_500_bf_scaffold_985_24
unknown

Not on your lists

16403..17443
DNA (1041bp) protein (347aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_25
unknown

Not on your lists

17424..18107
DNA (684bp) protein (228aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_985_26
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18088..18606)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2INC2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF32224.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
membrane protein
SCNpilot_expt_500_bf_scaffold_985_27
unknown

Not on your lists

comp(18596..18673)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 27 items

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