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SCNpilot_expt_500_bf_scaffold_930

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_930_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..661
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W217_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81542.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_930_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

658..1098
DNA (441bp) protein (147aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDJ3_9SPHN rbh
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENY81541.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_930_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1106..1645
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UST9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81540.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_930_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1642..3798
DNA (2157bp) protein (719aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ENY81539.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ENY81539.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2 5.4.99.4); K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT99_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_930_5
unknown

Not on your lists

3795..4325
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_930_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4322..5332
DNA (1011bp) protein (337aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
biotin synthase; K01012 biotin synthetase [EC:2.8.1.6] rbh
Biotin synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W212_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_930_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5329..5721
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDI8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81536.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_930_8
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5721..7742
DNA (2022bp) protein (674aa)
carbamoyl-phosphate synthase subunit L; K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] rbh
Carbamoyl-phosphate synthase L chain, ATP-binding n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTT4_SPHAL rbh
Carbamoyl-phosphate synthase L chain, ATP-binding protein {ECO:0000313|EMBL:KGB57247.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
SCNpilot_expt_500_bf_scaffold_930_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7834..8205
DNA (372bp) protein (124aa)
Secretion chaperone CsaA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT93_9SPHN
Secretion chaperone CsaA {ECO:0000313|EMBL:ENY81534.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
secretion chaperone CsaA; K06878 tRNA-binding protein
SCNpilot_expt_500_bf_scaffold_930_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..9587)
DNA (1386bp) protein (462aa)
Amino acid/peptide transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCP4_9SPHN rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:ENY81533.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
SCNpilot_expt_500_bf_scaffold_930_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9696..10910)
DNA (1215bp) protein (405aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3] rbh
Dihydroorotase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W208_9SPHN rbh
Dihydroorotase {ECO:0000313|EMBL:ENY81532.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_930_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10901..11896)
DNA (996bp) protein (332aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
pyrB; aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] rbh
Aspartate carbamoyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDI1_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_930_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11910..12260)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USS7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81530.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
inner membrane protein
SCNpilot_expt_500_bf_scaffold_930_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12302..12760)
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT87_9SPHN
SCNpilot_expt_500_bf_scaffold_930_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12871..14160)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCN8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81528.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_930_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14186..14695
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W204_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81527.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_930_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14650..15510
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W204_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81527.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_930_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15507..15926
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W204_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81527.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_930_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15974..16330
DNA (357bp) protein (119aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDH4_9SPHN
SCNpilot_expt_500_bf_scaffold_930_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16458..17939
DNA (1482bp) protein (494aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USS2_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_930_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18037..19503
DNA (1467bp) protein (489aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] rbh
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT80_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_930_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19541..20635)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCN1_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81523.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K07047 rbh
SCNpilot_expt_500_bf_scaffold_930_23
unknown

Not on your lists

20910..21131
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_930_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21244..21453)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1Z9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81522.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_930_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21796..23367
DNA (1572bp) protein (524aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Trigger factor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDG8_9SPHN rbh
tig; trigger factor; K03545 trigger factor rbh
SCNpilot_expt_500_bf_scaffold_930_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23534..24151)
DNA (618bp) protein (206aa)
HhH-GPD; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] rbh
HhH-GPD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USR9_9SPHN rbh
HhH-GPD {ECO:0000313|EMBL:ENY81520.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_930_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24251..24568
DNA (318bp) protein (106aa)
Ferredoxin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT74_9SPHN
Ferredoxin {ECO:0000313|EMBL:ENY81519.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
SCNpilot_expt_500_bf_scaffold_930_28
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24665..25459)
DNA (795bp) protein (265aa)
RNA methyltransferase TrmH, group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] rbh
RNA methyltransferase TrmH, group 3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCM4_9SPHN rbh
RNA methyltransferase TrmH, group 3 {ECO:0000313|EMBL:ENY81518.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_930_29
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25641..26780)
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC27185.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_expt_500_bf_scaffold_930_30
unknown

Not on your lists

comp(27250..27465)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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