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SCNpilot_expt_500_bf_scaffold_6453

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6453_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200..739
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVW3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82590.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6453_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

747..1211
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGL1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82591.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6453_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1211..1597
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4Y4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82592.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6453_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1581..1967
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFW2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82593.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6453_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2061..2276
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWG3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82594.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6453_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2332..2610)
DNA (279bp) protein (93aa)
ETC complex I subunit region n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVW9_9SPHN
ETC complex I subunit region {ECO:0000313|EMBL:ENY82595.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ETC complex I subunit region
SCNpilot_expt_500_bf_scaffold_6453_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2677..4677)
DNA (2001bp) protein (667aa)
ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] rbh
ATP-dependent helicase HrpB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGL7_9SPHN rbh
ATP-dependent helicase HrpB {ECO:0000313|EMBL:ENY82596.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_6453_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4697..5101)
DNA (405bp) protein (135aa)
ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13]
ATP-dependent helicase HrpB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGL7_9SPHN
ATP-dependent helicase HrpB {ECO:0000313|EMBL:ENY82596.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_6453_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5109..6122)
DNA (1014bp) protein (338aa)
trans-hexaprenyltranstransferase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] rbh
Trans-hexaprenyltranstransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4Z1_9SPHN rbh
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:ENY82597.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_6453_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6227..6514
DNA (288bp) protein (96aa)
chorismate mutase; K04092 chorismate mutase [EC:5.4.99.5]
Chorismate mutase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFX2_9SPHN
Chorismate mutase {ECO:0000313|EMBL:ENY82598.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_6453_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6511..7206
DNA (696bp) protein (232aa)
Glutathione S-transferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWH0_9SPHN rbh
Glutathione S-transferase {ECO:0000313|EMBL:ENY82599.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glutathione S-transferase rbh
SCNpilot_expt_500_bf_scaffold_6453_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7322..7792)
DNA (471bp) protein (157aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVX5_9SPHN
SCNpilot_expt_500_bf_scaffold_6453_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7782..10211)
DNA (2430bp) protein (810aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVX5_9SPHN
Displaying 13 items

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