ggKbase home page

SCNpilot_expt_500_bf_scaffold_2246

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2246_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1136
DNA (1134bp) protein (378aa)
Major facilitator superfamily transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9B5_9SPHN rbh
Major facilitator superfamily transporter {ECO:0000313|EMBL:ENY80046.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
major facilitator superfamily transporter rbh
SCNpilot_expt_500_bf_scaffold_2246_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1269..1928
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNM5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80045.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K07002
SCNpilot_expt_500_bf_scaffold_2246_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1934..2854
DNA (921bp) protein (307aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] rbh
Cysteine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNW4_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_2246_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2864..4006
DNA (1143bp) protein (381aa)
Cell wall hydrolase SleB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8K3_9SPHN rbh
Cell wall hydrolase SleB {ECO:0000313|EMBL:ENY80043.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cell wall hydrolase SleB rbh
SCNpilot_expt_500_bf_scaffold_2246_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4086..5222)
DNA (1137bp) protein (379aa)
Alcohol dehydrogenase GroES-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXP8_9SPHN rbh
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ENY80042.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
alcohol dehydrogenase GroES-like protein rbh
SCNpilot_expt_500_bf_scaffold_2246_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5303..6046)
DNA (744bp) protein (248aa)
inositol monophosphatase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] rbh
Inositol monophosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9B0_9SPHN rbh
Inositol monophosphatase {ECO:0000313|EMBL:ENY80041.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2246_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6043..6330)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNM0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80040.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2246_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6334..7326)
DNA (993bp) protein (331aa)
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein {ECO:0000313|EMBL:ENY80039.1}; EC=2.7.7.4 {ECO:0000313|EMBL:ENY80039.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNV9_9SPHN
SCNpilot_expt_500_bf_scaffold_2246_9
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7727..8242
DNA (516bp) protein (172aa)
Uncharacterized protein (Fragment) n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NT67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF93586.1}; Flags: Fragment;; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
SCNpilot_expt_500_bf_scaffold_2246_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8339..9244)
DNA (906bp) protein (302aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
sulfate adenylyltransferase subunit 2; K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] rbh
Sulfate adenylyltransferase subunit 2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8J5_9SPHN rbh
SCNpilot_expt_500_bf_scaffold_2246_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9381..10550
DNA (1170bp) protein (390aa)
acyl-CoA dehydrogenase-like protein; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4] rbh
Isovaleryl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXP2_9SPHN rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:ENY80037.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2246_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..10894
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9A5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80036.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2246_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10891..11310
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNL5_9SPHN
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENY80035.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_500_bf_scaffold_2246_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11307..11588
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNV5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80034.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2246_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11697..13781)
DNA (2085bp) protein (695aa)
peptidase M13; K07386 putative endopeptidase [EC:3.4.24.-] rbh
Endothelin-converting protein 1 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8I9_9SPHN rbh
Endothelin-converting protein 1 {ECO:0000313|EMBL:ENY80033.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2246_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13927..15525
DNA (1599bp) protein (533aa)
propionyl-CoA carboxylase; K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
Propionyl-CoA carboxylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXN4_9SPHN rbh
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ENY80032.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_2246_17
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15531..16712
DNA (1182bp) protein (394aa)
Carbamoyl-phosphate synthase subunit L n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9A0_9SPHN
Carbamoyl-phosphate synthase L chain, ATP-binding protein {ECO:0000313|EMBL:KGB54124.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
carbamoyl-phosphate synthase subunit L
Displaying 17 items

View Taxonomy