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SCNpilot_expt_500_bf_scaffold_812_5

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(2012..2434)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX86_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 272
  • Evalue 2.40e-70
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 272
  • Evalue 3.40e-70
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 7.40e-66

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGCGTCATAAATCGGGTGGCCGGAAGCTTCAGCGCACCGGCGCGCATCGCATCGCGATGTTCCGCAACATGTCGGCTTCGCTCATCAAGCATGAGCAGATCACGACGACCGTCGCCAAGGCGAAGGAACTGCGTCCCTATGTCGAAAAGCTGATCACGCTCGCAAAGCGTGGCGGCCTTGCCAATCGCCGTCTAGCGATGAGCCGCCTGATGGACGAAGCGCAGCTTCAGAAGCTGTTCGACGTCCTCGCCGAACGCTACAAGGACCGCAACGGCGGCTACACCCGCATCATCAAGGCCGGCATCCGCGCGTCGGACGCCGCGCCGATCGCGATCATCGAGTTCGTCGACCGCGACGTCGATGCCAAGGGCCAGGATTCGGGTCCGGTGCTGACCGACGAGGAACTGGAAGACGCGGCCTGA
PROTEIN sequence
Length: 141
MRHKSGGRKLQRTGAHRIAMFRNMSASLIKHEQITTTVAKAKELRPYVEKLITLAKRGGLANRRLAMSRLMDEAQLQKLFDVLAERYKDRNGGYTRIIKAGIRASDAAPIAIIEFVDRDVDAKGQDSGPVLTDEELEDAA*