name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_812_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..464)
|
TonB domain protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHB1_9SPHN
TonB domain protein {ECO:0000313|EMBL:ENY83058.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_812_2
unknown
|
Not on your lists |
comp(510..605)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_812_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(602..799)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W694_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83057.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_812_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
913..1914
|
Zinc-binding alcohol dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHU7_9SPHN
rbh
Zinc-binding alcohol dehydrogenase {ECO:0000313|EMBL:ENY83056.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
zinc-binding alcohol dehydrogenase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2012..2434)
|
50S ribosomal protein L17 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX86_9SPHN
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
|
|
SCNpilot_expt_500_bf_scaffold_812_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2574..3632)
|
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXT4_9SPHN
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_7
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3696..4085)
|
30S ribosomal protein S11 n=2 Tax=Sphingopyxis RepID=RS11_SPHAL
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
|
|
SCNpilot_expt_500_bf_scaffold_812_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4192..4560)
|
30S ribosomal protein S13 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W690_9SPHN
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
|
|
SCNpilot_expt_500_bf_scaffold_812_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4763..5554)
|
Inositol monophosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHU3_9SPHN
rbh
Inositol monophosphatase {ECO:0000313|EMBL:ENY83051.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_812_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5567..6910)
|
C69 family peptidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX81_9SPHN
rbh
C69 family peptidase {ECO:0000313|EMBL:ENY83050.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
C69 family peptidase; K03592 PmbA protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6970..7368)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXS6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83049.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_812_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7652..8254)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHA1_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY83048.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_812_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8339..8860)
|
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ubiquinone biosynthesis protein COQ7; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-]
rbh
Ubiquinone biosynthesis protein COQ7 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W684_9SPHN
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8857..9339)
|
Disulfide bond formation protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHT8_9SPHN
rbh
Disulfide bond formation protein {ECO:0000313|EMBL:ENY83046.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
disulfide bond formation protein
|
|
SCNpilot_expt_500_bf_scaffold_812_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9356..10744)
|
Carboxyl-terminal protease n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX74_9SPHN
rbh
Carboxyl-terminal protease {ECO:0000313|EMBL:ENY83045.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_812_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10879..12102)
|
Peptidase M23B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXS0_9SPHN
rbh
Peptidase M23B {ECO:0000313|EMBL:ENY83044.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
peptidase M23B
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12099..12560)
|
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH95_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_812_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12715..13125)
|
Ribosomal silencing factor RsfS n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W681_9SPHN
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Iojap-related protein; K09710 ribosome-associated protein
|
|
SCNpilot_expt_500_bf_scaffold_812_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13122..13775)
|
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
nadD; nicotinic acid mononucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
rbh
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHT3_9SPHN
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13772..14062)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000361DFEA
Uncharacterized protein {ECO:0000313|EMBL:AHE56622.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
|
|
SCNpilot_expt_500_bf_scaffold_812_21
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14059..14328)
|
Transcriptional regulator, CopG family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVM1_SPHAL
Transcriptional regulator, CopG family {ECO:0000313|EMBL:KGB58977.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
CopG family transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_812_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14360..15655)
|
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphi
proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
rbh
Gamma-glutamyl phosphate reductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX67_9SPHN
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15735..16868
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXR6_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY83039.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16924..18555
|
Alkaline phosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH88_9SPHN
rbh
Alkaline phosphatase {ECO:0000313|EMBL:ENY83038.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_812_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18641..19996
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W676_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY83037.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09760 DNA recombination protein RmuC
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20034..20744)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHT0_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY83036.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20779..21609)
|
tRNA/rRNA methyltransferase SpoU n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX61_9SPHN
rbh
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:ENY83035.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family
rbh
|
|
SCNpilot_expt_500_bf_scaffold_812_28
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21614..21892)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXQ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83034.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K11189 phosphocarrier protein
|
|
SCNpilot_expt_500_bf_scaffold_812_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21889..22317)
|
PTS system fructose subfamily transporter subunit IIA; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
PTS system fructose subfamily transporter subunit IIA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH82_9SPHN
PTS system fructose subfamily transporter subunit IIA {ECO:0000313|EMBL:ENY83033.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_812_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22332..23270)
|
Nucleotide-binding protein EBMC1_02990 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|