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SCNpilot_expt_500_bf_scaffold_5554_4

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(1398..4250)

Top 3 Functional Annotations

Value Algorithm Source
uvrA; excinuclease ABC subunit A (EC:3.6.3.29); K03701 excinuclease ABC subunit A similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 962.0
  • Bit_score: 1305
  • Evalue 0.0
excinuclease ABC subunit A n=1 Tax=Novispirillum itersonii RepID=UPI000380F222 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 962.0
  • Bit_score: 1324
  • Evalue 0.0
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 957.0
  • Bit_score: 1327
  • Evalue 0.0

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2853
ATGAGTCTCACCCATATTTCGGTGCGCGGCGCGCGCGAGCATAATCTGAAGGGCGTCGACGTCGATCTGCCGCGCGATGCACTGATCGTCATCACCGGCCTGTCGGGCAGCGGCAAGTCGAGCCTCGCCTTCGACACCATCTATGCCGAGGGTCAGCGGCGCTATGTCGAGAGCCTGTCGGCCTATGCACGCCAGTTCCTGGAAATGATGCAGAAGCCCGACGTCGAACATATCGACGGGCTGTCGCCGGCGATCAGCATCGAACAGAAGACGACGAGCCGCAACCCGCGCTCGACGGTCGCCACCGTCACGGAAATCTATGACTATATGCGCCTGCTCTGGGCGCGTGTCGGCATTCCCTATTCGCCCGCAACGGGCGAGCCGATCTCGGCGCAGACGGTCAGCCAGATGGTCGATCGGGTGATGGACCTGCCTGAAGGAACGCGGGCCTATCTGCTCGCGCCCGTCGTGCGGGGACGCAAGGGCGAATATAAGAAGGAACTCGCGCAGTGGCAGAAGGACGGCTTCACCCGCGTCCGCATCGACGGCGAATTTTACGAGATCGAGGACGCACCGGCGCTCGACAAGAAATACAAGCATGACATCGAGGTCGTGGTCGATCGCATCGTCGTACGCGAGGGGATCGCGACGCGGCTTGCGGACAGTTTCGAGACGGCGCTGAAACTCGCCGAAGGGCTCGCCTATGTCGACCTTGCCGACGGCGACGTTCCGGGGCGCGACGGCGAAGTCGGCGGCGCCATGAAAGGCGCCGGCATCCCTGCCAACCGCATCATCTTTTCCGAGAAATTTTCCTGCCCCGTTTCGGGCTTCACGATCGCCGAGATCGAACCGCGGCTGTTCAGCTTCAACGCGCCGCAGGGCGCTTGTCCCGCATGCGACGGCCTCGGCGAGCGGCTGGAATTCGACCCCGAACTCGTCGTTCCAAACCATGCGCTCAGCCTGAAAAAGGGCGCCGTCGTGCCATGGGCGAAATCGAACCCGCCCTCGCCCTATTATATGCAGGTGCTCGAAAGCCTGGGCAAAGCCTATGGTTTCGGCCTCGACACGCCGTGGCAGGATCTGCCCGGCGAGGTGCAGCTCATCATTCTTTATGGCAGCGGCGGCAAGCCGGTCGAGCTGACCTTCAAGGATGGCCGGCGCACCTATACAACGCACAAGGCGTTCGAGGGCGTGATCGGCAACCTCAACCGCCGGATGCTCCAGACCGAAAGCGCGTGGATGCGCGAGGAACTGGGCAAATATCAGACCGCACAGCCGTGCGAGACGTGCCACGGCGCGCGCCTGCGCCCCGAACCGCTCGCGGTCAAGATCGCGGGCGAGGACATCAGCATGTCGGCGCAGCGCTCGGTCGCCGACGCGCTCGCCTGGTTCAGCACGCTCGACGAGAAGCTCAATGATCAGCAGCGCCAGATCGCGAAGGCGATCCTGAAGGAGATCAACGAACGGCTCGGTTTCCTCAACAATGTCGGGCTCGATTATCTCAACCTCAACCGCACCAGCGGCACGCTCAGCGGCGGCGAAAGCCAGCGCATCCGTCTTGCGAGCCAGATCGGCTCGGGCCTCAGCGGCGTGCTCTATGTGCTCGACGAACCCAGCATCGGCCTGCACCAGCGCGACAACGACCGGCTGCTCGCAACGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCCCGGCGCGGGCGTCCATGGCGGCGAGATCGTCGCCGAAGGCACGCTGAAACAGGTGCTGGCGAACAAGAAGAGCCTGACCGCGGCCTACCTCACCGGCGCGAAGAAGATCGAGGTGCCGACGCACCGTCGCCCCGGCAACGGCTTCGATCTGGTGCTGAAGGGCGCGCGCGCCAACAACCTCCAGAATGTCACCGCGACGATCCCGCTCGGCACCTTCACCTGCGTCACCGGCCTGTCGGGATCGGGCAAGTCGAGCCTCGTCATCGACACGCTCTACGCCAGCGCGGCGCGCACGCTCAACGGCGCGCGGATGGTCGCGGGGCCGCACGACAGCCTGACCGGCCTTGAGCATTGCGACAAGGTGATCGACATCGACCAGTCGCCAATCGGCCGCACCCCGCGCTCGAACCCCGCGACCTATACGGGCGCTTTCACGACAATCCGCGACTGGTTCGCAGGGCTGCCCGAGGCGCAGGCGCGCGGTTACAAGCCCGGCCGCTTCAGCTTCAACGTCAAGGGCGGGCGCTGCGAAACCTGCACCGGCGACGGGCTGATCAAGATCGAGATGCACTTCCTGCCCGACGTCTATGTGACGTGCGAGACGTGCCACGGCAAACGCTACAACCGCGAAACGCTCGAGGTGAAGTTCAAGGGGATGAGCATCGCCGACGTGCTCGACATGACGGTCGAGGATGCGGCGGAGTTCTTCAAGGCGGTGCCCGCGATCCGCGACAAGATGGAGATGCTCGTCCGCGTCGGCCTCGGCTATATCAAGGTCGGGCAGCAGGCGACGACCTTGTCGGGCGGCGAGGCGCAGCGGGTGAAGCTCGCCAAGGAACTCTCGCGCCGCTCGACCGGACAGACGCTCTACATCCTCGACGAACCGACCACCGGCCTCCATTTCGAGGATGTGCGCAAGCTGCTCGAAGTGCTGCAGGCGCTGGTCGATCAGGGCAACAGCGTGGTGGTGATCGAGCATAACCTCGACGTCATCAAGACCGCCGACTGGATCGTCGACCTCGGCCCCGAAGGCGGGGTCAAGGGCGGCGAGATCGTCGCGGCGGGGACGCCCGAACAGGTGGTGAAGGAACCGCGCAGCTTCACCGGGCAATATCTGGCGCCGTTGCTGGCGAAATGA
PROTEIN sequence
Length: 951
MSLTHISVRGAREHNLKGVDVDLPRDALIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIPYSPATGEPISAQTVSQMVDRVMDLPEGTRAYLLAPVVRGRKGEYKKELAQWQKDGFTRVRIDGEFYEIEDAPALDKKYKHDIEVVVDRIVVREGIATRLADSFETALKLAEGLAYVDLADGDVPGRDGEVGGAMKGAGIPANRIIFSEKFSCPVSGFTIAEIEPRLFSFNAPQGACPACDGLGERLEFDPELVVPNHALSLKKGAVVPWAKSNPPSPYYMQVLESLGKAYGFGLDTPWQDLPGEVQLIILYGSGGKPVELTFKDGRRTYTTHKAFEGVIGNLNRRMLQTESAWMREELGKYQTAQPCETCHGARLRPEPLAVKIAGEDISMSAQRSVADALAWFSTLDEKLNDQQRQIAKAILKEINERLGFLNNVGLDYLNLNRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNDRLLATXXXXXXXXXXXXXXXXXGPGAGVHGGEIVAEGTLKQVLANKKSLTAAYLTGAKKIEVPTHRRPGNGFDLVLKGARANNLQNVTATIPLGTFTCVTGLSGSGKSSLVIDTLYASAARTLNGARMVAGPHDSLTGLEHCDKVIDIDQSPIGRTPRSNPATYTGAFTTIRDWFAGLPEAQARGYKPGRFSFNVKGGRCETCTGDGLIKIEMHFLPDVYVTCETCHGKRYNRETLEVKFKGMSIADVLDMTVEDAAEFFKAVPAIRDKMEMLVRVGLGYIKVGQQATTLSGGEAQRVKLAKELSRRSTGQTLYILDEPTTGLHFEDVRKLLEVLQALVDQGNSVVVIEHNLDVIKTADWIVDLGPEGGVKGGEIVAAGTPEQVVKEPRSFTGQYLAPLLAK*