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SCNpilot_expt_500_bf_scaffold_5554

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5554_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5554_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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190..546
DNA (357bp) protein (119aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGJ6_9SPHN
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ENY82571.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
antibiotic biosynthesis monooxygenase
SCNpilot_expt_500_bf_scaffold_5554_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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703..1254
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVT8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82570.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5554_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1398..4250)
DNA (2853bp) protein (951aa)
uvrA; excinuclease ABC subunit A (EC:3.6.3.29); K03701 excinuclease ABC subunit A
excinuclease ABC subunit A n=1 Tax=Novispirillum itersonii RepID=UPI000380F222
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_expt_500_bf_scaffold_5554_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4485..6029
DNA (1545bp) protein (515aa)
endothelin-converting protein 1 (EC:3.4.24.71)
Endothelin-converting protein 1 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS7_9SPHN rbh
Endothelin-converting protein 1 {ECO:0000313|EMBL:ENY82568.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_5554_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6026..6529
DNA (504bp) protein (168aa)
endothelin-converting protein 1 (EC:3.4.24.71)
Endothelin-converting protein 1 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS7_9SPHN
Endothelin-converting protein 1 {ECO:0000313|EMBL:ENY82568.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_5554_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6635..7021
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4V6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82567.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5554_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7291..7662
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGJ1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82566.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_5554_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7679..8413)
DNA (735bp) protein (245aa)
Response regulator receiver protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVT0_9SPHN rbh
Response regulator receiver protein {ECO:0000313|EMBL:ENY82565.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
response regulator receiver protein; K08083 two-component system, LytT family, response regulator AlgR rbh
SCNpilot_expt_500_bf_scaffold_5554_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8415..9587)
DNA (1173bp) protein (391aa)
Signal transduction histidine kinase LytS n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWC1_9SPHN rbh
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:ENY82564.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
signal transduction histidine kinase LytS rbh
SCNpilot_expt_500_bf_scaffold_5554_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9680..11137)
DNA (1458bp) protein (486aa)
MATE efflux family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS0_9SPHN rbh
MATE efflux family protein {ECO:0000313|EMBL:ENY82563.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MATE efflux family protein
SCNpilot_expt_500_bf_scaffold_5554_12
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11134..12885)
DNA (1752bp) protein (584aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
Valine--tRNA ligase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=SYV_SPHAL
Displaying 12 items

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