ggKbase home page

SCNpilot_expt_500_bf_scaffold_5554_12

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(11134..12885)

Top 3 Functional Annotations

Value Algorithm Source
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 496.0
  • Bit_score: 761
  • Evalue 2.30e-217
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 496.0
  • Bit_score: 761
  • Evalue 1.00e-216
Valine--tRNA ligase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=SYV_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 496.0
  • Bit_score: 761
  • Evalue 7.20e-217

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGCAGGCGGTGCGCGATGGCCGCATCAACATCGTCCCCAAGACGTGGGAAAAGACCTTCTTCAACTGGATGGAGAATATCCAGCCCTGGTGCGTCTCGCGCCAACTCTGGTGGGGACACCGGATTCCGGCTTGGTACGGGCCGGAAGCTTACGCAGACGACGAAAAGCTATCACCCAATTGGCCTGACCTTTCATTTGATGTGAGCGAAGACTTCGCGACGGCTAACTCGACGTTGCTGTCCGATCATGTTTTTGTGAACGAAACTGAAGAAGGTGCCATTGAAGCAGCGAAGAGTTATTACGGTAGCAAGCTGGGCGACCGTGAGATCATCGTTTGCGAAGATCGACTTTCTGCGATGGCCATGTTGTTGAACGGCGAATTTGATCTCAGCAAGTCGGTTCCAATTTGGCGCGATGCCGACGTCCTCGACACCTGGTTCTCCTCCGCGCTCTGGCCCTTCGCGACGCTCGGCTGGCCTGAAAACACCGAGCTTCTGAAACGCCACTACCCCAACGACGTCCTCATCTCGGGCTTCGACATCCTCTTCTTCTGGGATGCGCGCATGGCCATGCAGGGGATGGAGTTCATGGGCGACGTGCCGTGGAAGACGCTCTATCTCCACGGCCTTGTCCGCGCGCCCGACGGCGCGAAGATGTCGAAGTCGAAGGGCAACGTCGTCGATCCACTCGGGCTGATCGACCAATATGGCGCCGACGCGCTGCGCTTCTTCATGGCGGCGATGGAAAGCCAGGGCCGCGACATCAAGATGGATGACGCGCGCCTCGCGGGCTATCGCAACTTCGCGACCAAGCTCTGGAACGCCGCGCGCTTCTGCGAAGCGAACGGCATTTCGGCCTCGACCAGCTGCGAAGCCCCCGTCGCAACGTTGCCGGTCAACCGCTGGATCATCGGCGAGGTCGCCGCGACCGTCGCGGCGATGGAGAGCGCCTTCGCCGCCTATCGCTTCGACGAGGCCGCGAACGCGATCTACAGCTTTGCCTGGGACCGCTTCTGCGATTGGTATCTGGAATTGATCAAGCCGATCCTGAACCCCGGAACCGCCCCCAATTCCGTTCGGGCTGAGCCTGTCGAAGCCCCGTCCTTCTCGTCGAACGGCGATGGAGAAAAGAGCGGCCCTTCGACAAGCTCAGGGCAAACGGAGGTTGAGGAAACACGCACCGTTGCCGGCTGGGTGCTCGACCAGATTCTCGTCATGCTGCACCCCTTCATGCCCTTCATCACCGAAGAGCTGTGGACGGGTCTCGGCGACCGCGCCGACTATCCGCTGATCACCGCCAAATGGCCTGCTCCGGCGGCCGAGAAGGACGCGGGCGCCAGCGCCGACATCGACTGGCTGATCAAGCTCGTCAGCGAGCTGCGCACCGCCAAGGCCGAGCTCGGCCTGCCGCCGGGCGCGCGCCTGACCGCGCATTTCCCGGCGTCGCTCAAGGGCCGCACCGACAAGCTATCGGCGCAACTCGACCGTCTCGCGCGGCTCGAAGCGATCAGCTTCGATCCCGCTCCGGCTGGCGCCTCGGCACAGCTCGTCGTCGAGGGTGAGACGATCACCGTTCCGCTCGAAGGCGTGATCGACATCGCTGCCGAGCGCGAGCGGCTGACCAAGGCGCTTGCCGCCGCGGCCAAGGAACGCGACAGCCTCNCCGAAGCGGTCGACAAGGCGCGCGCCGACCATGCCGCCAAGGAGGCCGAGGCCGACCGCCTGACCGCCGCGCTGGCCCGGCTGGGGTGA
PROTEIN sequence
Length: 584
MQAVRDGRINIVPKTWEKTFFNWMENIQPWCVSRQLWWGHRIPAWYGPEAYADDEKLSPNWPDLSFDVSEDFATANSTLLSDHVFVNETEEGAIEAAKSYYGSKLGDREIIVCEDRLSAMAMLLNGEFDLSKSVPIWRDADVLDTWFSSALWPFATLGWPENTELLKRHYPNDVLISGFDILFFWDARMAMQGMEFMGDVPWKTLYLHGLVRAPDGAKMSKSKGNVVDPLGLIDQYGADALRFFMAAMESQGRDIKMDDARLAGYRNFATKLWNAARFCEANGISASTSCEAPVATLPVNRWIIGEVAATVAAMESAFAAYRFDEAANAIYSFAWDRFCDWYLELIKPILNPGTAPNSVRAEPVEAPSFSSNGDGEKSGPSTSSGQTEVEETRTVAGWVLDQILVMLHPFMPFITEELWTGLGDRADYPLITAKWPAPAAEKDAGASADIDWLIKLVSELRTAKAELGLPPGARLTAHFPASLKGRTDKLSAQLDRLARLEAISFDPAPAGASAQLVVEGETITVPLEGVIDIAAERERLTKALAAAAKERDSLXEAVDKARADHAAKEAEADRLTAALARLG*