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SCNpilot_expt_500_bf_scaffold_200_curated

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_200_curated_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(270..3272)
DNA (3003bp) protein (1001aa)
Predicted ATPase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EU33_9BACT
Predicted ATPase
Predicted ATPase {ECO:0000313|EMBL:CCW35156.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_expt_500_bf_scaffold_200_curated_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3678..4517
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003613A9C
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ABJ82596.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_expt_500_bf_scaffold_200_curated_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4511..4906
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI00034622E8
Membrane protein {ECO:0000313|EMBL:KIF35155.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Predicted membrane protein
SCNpilot_expt_500_bf_scaffold_200_curated_4
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4957..7263
DNA (2307bp) protein (769aa)
Glucosyl hydrolase family protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZYW5_MELRP
Uncharacterized protein {ECO:0000313|EMBL:KGE89327.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
glucosyl hydrolase family protein
SCNpilot_expt_500_bf_scaffold_200_curated_5
unknown

Not on your lists

8351..8887
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_200_curated_6
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8925..9563
DNA (639bp) protein (213aa)
Putative NADH-flavin reductase n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4ZEL4_PAEAL
Putative NADH-flavin reductase {ECO:0000313|EMBL:EJW17199.1}; TaxID=1206781 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei DSM 29.;"
NAD-dependent epimerase/dehydratase; K07118
SCNpilot_expt_500_bf_scaffold_200_curated_7
Cobetia marina, Cobetia, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9687..10106
DNA (420bp) protein (140aa)
oxidoreductase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A42B25
Uncharacterized protein {ECO:0000313|EMBL:KGA01872.1}; TaxID=28258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Cobetia.;" source="Cobetia marina (Deleya marina).;"
DoxX; K15977 putative oxidoreductase
SCNpilot_expt_500_bf_scaffold_200_curated_8
unknown

Not on your lists

comp(10141..10953)
DNA (813bp) protein (271aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_200_curated_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11144..11659
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHN5_AFIFE
Glyoxalase {ECO:0000313|EMBL:KJB91623.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K07104
SCNpilot_expt_500_bf_scaffold_200_curated_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11649..12746)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZVK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15340.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glycosidase PH1107-like protein
SCNpilot_expt_500_bf_scaffold_200_curated_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12830..13702
DNA (873bp) protein (291aa)
Aminoglycoside phosphotransferase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2F4_CATAD
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACU69796.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_expt_500_bf_scaffold_200_curated_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13699..16404)
DNA (2706bp) protein (902aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218E5_RHOPB
multi-sensor hybrid histidine kinase
SCNpilot_expt_500_bf_scaffold_200_curated_13
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16603..18120)
DNA (1518bp) protein (506aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NLP4_9CAUL
PAS/PAC sensor signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_200_curated_14
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(18345..18854)
DNA (510bp) protein (170aa)
acetyltransferase (EC:2.3.1.128) id=7202033 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
putative N-acetyltransferase
Tax=RIFOXYC12_FULL_TA06_54_24_curated
SCNpilot_expt_500_bf_scaffold_200_curated_15
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18836..20980)
DNA (2145bp) protein (715aa)
nahA1; beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52]
Beta-N-acetylhexosaminidase, family GH20 {ECO:0000313|EMBL:CAZ95083.1}; EC=3.2.1.52 {ECO:0000313|EMBL:CAZ95083.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
Beta-N-acetylhexosaminidase, family GH20 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L2M9_ZOBGA
SCNpilot_expt_500_bf_scaffold_200_curated_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(21006..21806)
DNA (801bp) protein (267aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=U3GM44_SINAD
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AIE85701.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_200_curated_17
unknown

Not on your lists

22067..22600
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_200_curated_18
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22602..24047)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Nocardiopsis salina RepID=UPI00034B71D7
Asparagine synthase {ECO:0000313|EMBL:KIE36148.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
SCNpilot_expt_500_bf_scaffold_200_curated_19
unknown

Not on your lists

24109..24288
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_200_curated_20
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24376..25332)
DNA (957bp) protein (319aa)
Peptidoglycan-binding domain 1 protein id=4498238 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
peptidoglycan binding domain-containing protein
Tax=GWC2_Pelobacteraceae_58_13_curated
SCNpilot_expt_500_bf_scaffold_200_curated_21
unknown

Not on your lists

comp(25544..25801)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_200_curated_22
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(25948..26679)
DNA (732bp) protein (244aa)
Putative transcriptional regulator n=1 Tax=Serratia marcescens FGI94 RepID=L0MCZ5_SERMA
Putative transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:AIE87729.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
putative transcriptional regulator
SCNpilot_expt_500_bf_scaffold_200_curated_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26828..30670)
DNA (3843bp) protein (1281aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5V1_NITWC
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_500_bf_scaffold_200_curated_24
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

31387..32232
DNA (846bp) protein (282aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EV89_9BACT
prepilin-type N-terminal cleavage/methylation domain
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CCW35652.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_expt_500_bf_scaffold_200_curated_25
unknown

Not on your lists

32242..32424
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_200_curated_26
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32521..33420
DNA (900bp) protein (300aa)
Formiminoglutamase; K01479 formiminoglutamase [EC:3.5.3.8]
Arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase n=1 Tax=actinobacterium SCGC AAA027-L06 RepID=J9DV34_9ACTN
Formimidoylglutamase {ECO:0000313|EMBL:KGM10383.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_expt_500_bf_scaffold_200_curated_27

Not on your lists

33417..34676
DNA (1260bp) protein (420aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7]
Imidazolonepropionase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=HUTI_SOLUE rbh
SCNpilot_expt_500_bf_scaffold_200_curated_28
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35379..37541
DNA (2163bp) protein (721aa)
AAA ATPase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5M9C0_9RHIZ
AAA ATPase {ECO:0000313|EMBL:EJT01465.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
AAA ATPase
SCNpilot_expt_500_bf_scaffold_200_curated_29
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37538..38398
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9E4X3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP95126.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_200_curated_30
unknown

Not on your lists

38407..39504
DNA (1098bp) protein (366aa)

This feature has no annotations

Displaying items 1-30 of 97 in total

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