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SCNpilot_expt_500_bf_scaffold_253_curated

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_253_curated_1
unknown

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3..137
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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134..1726
DNA (1593bp) protein (531aa)
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP dependent DNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020V4_SOLUE
ATP dependent DNA ligase {ECO:0000313|EMBL:ABJ84535.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_expt_500_bf_scaffold_253_curated_3
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1735..2679)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031409A7
Uncharacterized protein {ECO:0000313|EMBL:AHF11216.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_253_curated_4
unknown

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comp(2875..3237)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_5
unknown

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comp(3277..3546)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_6
unknown

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comp(4439..4678)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_7
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

4959..5189
DNA (231bp) protein (77aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/H associated domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI28_ROSCS
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:AIE87405.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_253_curated_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

5214..5879
DNA (666bp) protein (222aa)
ICC-like phosphoesterase-like protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ54_ROSS1
ICC-like phosphoesterase {ECO:0000313|EMBL:AIE87404.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
ICC-like phosphoesterase
SCNpilot_expt_500_bf_scaffold_253_curated_9
unknown

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comp(5881..6636)
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_10
unknown

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comp(6791..7027)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_11
unknown

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comp(7090..8166)
DNA (1077bp) protein (359aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_12
unknown

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comp(8163..8495)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_13
unknown

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comp(8492..8629)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_14
unknown

Not on your lists

comp(8632..9567)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_15
unknown

Not on your lists

comp(9628..9903)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_16
unknown

Not on your lists

comp(9935..10063)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_17
unknown

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comp(10060..10176)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_18
unknown

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comp(10181..10372)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_19
unknown

Not on your lists

comp(10348..10563)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_20
unknown

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comp(10556..10843)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_21
unknown

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11020..11667
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_22
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11698..12702)
DNA (1005bp) protein (335aa)
Replication initiation factor n=1 Tax=Leptospira interrogans str. FPW1039 RepID=M5YFC3_LEPIR
Replication initiation factor {ECO:0000313|EMBL:EMJ37958.1}; TaxID=1193040 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans str. FPW1039.;"
SCNpilot_expt_500_bf_scaffold_253_curated_23
unknown

Not on your lists

comp(12966..13178)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_253_curated_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


13339..14676
DNA (1338bp) protein (446aa)
Signal recognition particle protein n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EEM8_THECK
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
signal recognition particle protein
SCNpilot_expt_500_bf_scaffold_253_curated_25
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists


14693..15115
DNA (423bp) protein (141aa)
30S ribosomal protein S16 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPA6_KYRT2
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
SCNpilot_expt_500_bf_scaffold_253_curated_26
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

15121..15360
DNA (240bp) protein (80aa)
UPF0109 protein BN574_01596 n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6IBZ1_9FIRM
UPF0109 protein OP10G_4029 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
RNA-binding protein; K06960
SCNpilot_expt_500_bf_scaffold_253_curated_27
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

15435..15923
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B64575
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
rimM; 16S rRNA processing protein; K02860 16S rRNA processing protein RimM
SCNpilot_expt_500_bf_scaffold_253_curated_28
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

15992..17257
DNA (1266bp) protein (422aa)
GTPase Obg n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYW4_9BACT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Obg family GTPase CgtA
SCNpilot_expt_500_bf_scaffold_253_curated_29
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

17254..17847
DNA (594bp) protein (198aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;
nadD; nicotinate (nicotinamide) nucleotideadenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=2 Tax=Dehalococcoides mccartyi RepID=NADD_DEHSB
SCNpilot_expt_500_bf_scaffold_253_curated_30
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

17844..18197
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=4 Tax=Vibrio RepID=A7MY90_VIBCB
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein; K09710 ribosome-associated protein
Displaying items 1-30 of 163 in total

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