ggKbase home page

SCNpilot_expt_500_bf_scaffold_182_curated

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_182_curated_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(2..928)
DNA (927bp) protein (309aa)
Exonuclease of the beta-lactamase fold involved in RNA processing-like protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTM1_ROSS1
RNA procession exonuclease-like protein {ECO:0000313|EMBL:AIE87097.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
RNA procession exonuclease-like protein; K07577 putative mRNA 3-end processing factor
SCNpilot_expt_500_bf_scaffold_182_curated_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

1000..2520
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WU5_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:AIE83860.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_182_curated_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2520..3905
DNA (1386bp) protein (462aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF06638.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCNpilot_expt_500_bf_scaffold_182_curated_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

3932..4843
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344AC2F
Ribonuclease BN {ECO:0000313|EMBL:AIE87098.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_182_curated_5
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(4758..5633)
DNA (876bp) protein (292aa)
Lipoprotein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R0X9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIE88047.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
lipoprotein
SCNpilot_expt_500_bf_scaffold_182_curated_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

5741..7105
DNA (1365bp) protein (455aa)
Glycosyltransferase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYH2_9BACT
Glycosyltransferase {ECO:0000313|EMBL:AIE87099.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Glycosyltransferase
SCNpilot_expt_500_bf_scaffold_182_curated_7
unknown

Not on your lists

7142..7675
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_182_curated_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(7679..9859)
DNA (2181bp) protein (727aa)
Ferrous iron transport protein B n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EQL6_CORAD
Ferrous iron transport protein B {ECO:0000313|EMBL:AIE87610.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
ferrous iron transport protein B; K04759 ferrous iron transport protein B
SCNpilot_expt_500_bf_scaffold_182_curated_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(9868..10119)
DNA (252bp) protein (84aa)
FeoA family protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6Y6I4_9CLOT
Ferrous iron transport protein A {ECO:0000313|EMBL:AIE87609.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Fe2+ transport system protein A; K04758 ferrous iron transport protein A
SCNpilot_expt_500_bf_scaffold_182_curated_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(10201..10971)
DNA (771bp) protein (257aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87505.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_11
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10975..11514)
DNA (540bp) protein (180aa)
ATP--cobalamin adenosyltransferase n=2 Tax=Chloroflexus RepID=A9WKL9_CHLAA
ATP--cobalamin adenosyltransferase
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:ABY36647.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_expt_500_bf_scaffold_182_curated_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(11511..12260)
DNA (750bp) protein (250aa)
N-acetylmannosaminyltransferase (EC:2.4.1.187)
N-acetylmannosaminyltransferase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZW6_9BACT
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase {ECO:0000313|EMBL:AIE87503.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_13
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

12445..13254
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI00037E23A8
prepilin-type N-terminal cleavage/methylation domain
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CCW35843.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_expt_500_bf_scaffold_182_curated_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

13352..14134
DNA (783bp) protein (261aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DVB0_DESRL
Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:AIE87502.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14169..14651
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87501.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14648..15454
DNA (807bp) protein (269aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00036C43AF
SCNpilot_expt_500_bf_scaffold_182_curated_17
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15519..17468)
DNA (1950bp) protein (650aa)
Thiol:disulfide interchange protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZS8_9BACT
Thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:CCW36567.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_expt_500_bf_scaffold_182_curated_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(17517..18587)
DNA (1071bp) protein (357aa)
Glycosyl transferase group 1 n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B721_DESCC
Glycosyl transferase, group 1 {ECO:0000313|EMBL:AIE87498.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
group 1 glycosyl transferase
SCNpilot_expt_500_bf_scaffold_182_curated_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(18584..19477)
DNA (894bp) protein (298aa)
acetyl esterase; K01060 cephalosporin-C deacetylase [EC:3.1.1.41]
Acetyl esterase (Deacetylase) n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXR0_CLOCD
Acetyl xylan esterase {ECO:0000313|EMBL:AIE87497.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_20
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(19474..19713)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0Z855_9BACT
Ferredoxin {ECO:0000313|EMBL:AIE87496.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_182_curated_21
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

19829..20974
DNA (1146bp) protein (382aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZY1_9BACT
2-isopropylmalate synthase {ECO:0000313|EMBL:AIE87478.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_22
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21058..21645
DNA (588bp) protein (196aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037BB1B4
SCNpilot_expt_500_bf_scaffold_182_curated_23
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(21642..22220)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4N5B6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AIE87279.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_182_curated_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(22225..22815)
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
leuD; isopropylmalate isomerase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
isopropylmalate isomerase n=1 Tax=Bacillus anthracis RepID=UPI0001B41811
SCNpilot_expt_500_bf_scaffold_182_curated_25
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

22846..24312
DNA (1467bp) protein (489aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase, component I n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWK4_9BACT
Anthranilate synthase component I {ECO:0000313|EMBL:AIE87899.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_26
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(24368..25249)
DNA (882bp) protein (294aa)
Tetratricopeptide repeat protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKF2_9FIRM
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:AIE87900.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Flp pilus assembly protein TadD
SCNpilot_expt_500_bf_scaffold_182_curated_27
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(25270..27318)
DNA (2049bp) protein (683aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87901.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SCNpilot_expt_500_bf_scaffold_182_curated_28
unknown

Not on your lists

comp(27386..27511)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_182_curated_29
unknown

Not on your lists

28307..28522
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_182_curated_30
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(28515..31085)
DNA (2571bp) protein (857aa)
maltodextrin phosphorylase (EC:2.4.1.1)
Maltodextrin phosphorylase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUP7_9BACT
Alpha-glucan phosphorylase {ECO:0000313|EMBL:AIE88012.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Displaying items 1-30 of 130 in total

View Taxonomy