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SCNpilot_expt_500_bf_scaffold_137_curated

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Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_137_curated_1
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(149..628)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISS3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KIC00474.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_2
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(645..1082)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036ED26A
Uncharacterized protein {ECO:0000313|EMBL:KIC00537.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_3
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1157..2428)
DNA (1272bp) protein (424aa)
sensor protein (EC:2.7.13.3)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000368C6B1
Uncharacterized protein {ECO:0000313|EMBL:KIC00473.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SCNpilot_expt_500_bf_scaffold_137_curated_4
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2428..3099)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037CA974
Transcriptional regulator {ECO:0000313|EMBL:KFF09717.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
transcriptional regulatory protein ciaR
SCNpilot_expt_500_bf_scaffold_137_curated_5
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3185..4804)
DNA (1620bp) protein (540aa)
Dipeptide-binding ABC transporter, periplasmic substrate-binding component n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRF4_9FLAO
Dipeptide-binding ABC transporter, periplasmic substrate-binding component {ECO:0000313|EMBL:EIA08937.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
dipeptide ABC transporter substrate-binding protein
SCNpilot_expt_500_bf_scaffold_137_curated_6
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4897..6228
DNA (1332bp) protein (444aa)
MiaB-like tRNA modifying protein (EC:1.3.1.74); K08070 2-alkenal reductase [EC:1.3.1.74]
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ABQ08038.1}; EC=1.3.1.74 {ECO:0000313|EMBL:ABQ08038.1};; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
MiaB-like tRNA modifying enzyme n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5F9T5_FLAJ1
SCNpilot_expt_500_bf_scaffold_137_curated_7
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6243..6578)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B55CAB
Uncharacterized protein {ECO:0000313|EMBL:KGD69648.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
SCNpilot_expt_500_bf_scaffold_137_curated_8
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6931..7215)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B37A3B
Acetyltransferase {ECO:0000313|EMBL:KGD69649.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_9
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7411..8073
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLQ4_9FLAO
Alpha/beta hydrolase {ECO:0000313|EMBL:KIA99175.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_10
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8131..9024
DNA (894bp) protein (298aa)
putative membrane-bound lytic murein transglycosylase (EC:3.2.1.-)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000364A80F
Murein transglycosylase {ECO:0000313|EMBL:KGO87527.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
SCNpilot_expt_500_bf_scaffold_137_curated_11
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9076..9591)
DNA (516bp) protein (172aa)
membrane protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B35421
Membrane protein {ECO:0000313|EMBL:KIA87631.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_12
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


9760..9921
DNA (162bp) protein (54aa)
50S ribosomal protein L34 n=6 Tax=Flavobacterium RepID=A5FNT8_FLAJ1
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
SCNpilot_expt_500_bf_scaffold_137_curated_13
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10009..12903
DNA (2895bp) protein (965aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase large chain n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLP9_9FLAO
SCNpilot_expt_500_bf_scaffold_137_curated_14
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12942..15284)
DNA (2343bp) protein (781aa)
TonB-dependent outer membrane receptor n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CPD1_ELIME
TonB-dependent outer membrane receptor {ECO:0000313|EMBL:EOR31168.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
TonB-dependent outer membrane receptor precursor
SCNpilot_expt_500_bf_scaffold_137_curated_15
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15502..16581
DNA (1080bp) protein (360aa)
Signal transduction histidine kinase LytS n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CPB2_ELIME
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EOR31167.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
signal transduction histidine kinase LytS
SCNpilot_expt_500_bf_scaffold_137_curated_16
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16578..17297
DNA (720bp) protein (240aa)
LytTR family two component transcriptional regulator n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CVE5_ELIME
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:EOR31166.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
LytTR family two component transcriptional regulator
SCNpilot_expt_500_bf_scaffold_137_curated_17
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17505..18026
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SPP3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA87281.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
ankyrin repeat-containing protein; K06867
SCNpilot_expt_500_bf_scaffold_137_curated_18
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18028..18786
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZ47_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19698.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_19
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18888..20915)
DNA (2028bp) protein (676aa)
ASPIC/UnbV domain-containing protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S5R3_9FLAO
ASPIC/UnbV domain-containing protein {ECO:0000313|EMBL:ESU19700.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
ASPIC/UnbV domain-containing protein
SCNpilot_expt_500_bf_scaffold_137_curated_20
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20938..22035)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZ06_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19701.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_21
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22150..22695)
DNA (546bp) protein (182aa)
Thioesterase {ECO:0000313|EMBL:KGO84516.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Acyl CoA thioester hydrolase family protein id=3025791 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
acyl-CoA hydrolase
SCNpilot_expt_500_bf_scaffold_137_curated_22
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22708..24072)
DNA (1365bp) protein (455aa)
DNA recombination protein RmuC n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SQ63_9FLAO
DNA recombination protein RmuC {ECO:0000313|EMBL:ESU28599.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein; K09760 DNA recombination protein RmuC
SCNpilot_expt_500_bf_scaffold_137_curated_23
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24310..25911
DNA (1602bp) protein (534aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC20304.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Uncharacterized protein id=4380751 bin=GWF2_Bacteroidetes_43_63 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_24
unknown

Not on your lists

26114..26530
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_137_curated_25
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26594..27031
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000367BAB0
Uncharacterized protein {ECO:0000313|EMBL:KFF02240.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_26
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27125..27664
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037E00A1
Uncharacterized protein {ECO:0000313|EMBL:KGO92322.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_27
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27673..28002)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FNW2_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KIA87659.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_137_curated_28
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28115..28684
DNA (570bp) protein (190aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
pseudouridine synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Pseudouridine synthase n=1 Tax=Flavobacterium sp. CF136 RepID=J2JEG9_9FLAO
SCNpilot_expt_500_bf_scaffold_137_curated_29
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28700..29149
DNA (450bp) protein (150aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
rRNA methyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S888_9FLAO
SCNpilot_expt_500_bf_scaffold_137_curated_30
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29186..30793
DNA (1608bp) protein (536aa)
polyketide synthase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034815EA
Polyketide synthase {ECO:0000313|EMBL:KIA99535.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
Displaying items 1-30 of 107 in total

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