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SCNpilot_expt_500_bf_scaffold_1121_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1121_curated_1
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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89..1015
DNA (927bp) protein (309aa)
Site-specific recombinase, phage integrase family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWD0_9FLAO
Integrase {ECO:0000313|EMBL:KDN53659.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
intQ; integrase
SCNpilot_expt_500_bf_scaffold_1121_curated_2
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1119..3983
DNA (2865bp) protein (955aa)
Type I deoxyribonuclease HsdR {ECO:0000313|EMBL:KDN53660.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KDN53660.1};; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
HSDR; hypothetical protein; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Type I site-specific deoxyribonuclease, HsdR family id=4190386 bin=GWF2_Bacteroidetes_33_38 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
SCNpilot_expt_500_bf_scaffold_1121_curated_3
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4008..4703)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NSZ0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KGO09139.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1121_curated_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4721..5437)
DNA (717bp) protein (239aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2W0_PALPW
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADQ79054.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_expt_500_bf_scaffold_1121_curated_5
unknown

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5629..5775
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1121_curated_6
unknown

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5825..5947
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1121_curated_7
unknown

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comp(8289..8708)
DNA (420bp) protein (140aa)

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SCNpilot_expt_500_bf_scaffold_1121_curated_8
unknown

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comp(9777..10169)
DNA (393bp) protein (131aa)

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SCNpilot_expt_500_bf_scaffold_1121_curated_9
unknown

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comp(10308..10712)
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 9 items

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