name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_1868_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..492)
|
phosphoserine phosphatase SerB; K01079 phosphoserine phosphatase [EC:3.1.3.3]
Phosphoserine phosphatase SerB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQH4_9SPHN
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:ENY80690.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
530..1450
|
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB63_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1547..3301
|
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZQ0_9SPHN
Acetolactate synthase large subunit {ECO:0000313|EMBL:ENY80692.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3450..3965
|
Acetolactate synthase 3 regulatory subunit {ECO:0000313|EMBL:ENY80693.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ENY80693.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ilvH; acetolactate synthase 3 regulatory subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase 3 regulatory subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAJ6_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4092..5111
|
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQV9_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_6
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5176..5868)
|
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6337..6945
|
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
bioD; dithiobiotin synthetase; K01935 dethiobiotin synthetase [EC:6.3.3.3]
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB67_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_8
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6953..7900)
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ERU7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX08034.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8360..8776
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAK0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80698.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_10
unknown
|
Not on your lists |
comp(8968..10371)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1868_curated_11
unknown
|
Not on your lists |
comp(10471..11073)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1868_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11366..12199
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQW3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80699.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12292..12933
|
YceI protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQI3_9SPHN
YceI protein {ECO:0000313|EMBL:ENY80700.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
YceI protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13015..13416
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB71_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80701.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13684..15348
|
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZQ7_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_16
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15368..16990)
|
UPI0003D6C09D related cluster n=1 Tax=unknown RepID=UPI0003D6C09D
Uncharacterized protein {ECO:0000313|EMBL:AHD03020.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methylohalidivorans DSM 14336.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17149..18156
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQI8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80705.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_18
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18202..18831)
|
Putative chemotaxis transducer n=1 Tax=Sphingobium indicum B90A RepID=I5BF37_9SPHN
Putative chemotaxis transducer {ECO:0000313|EMBL:EIM68189.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
putative chemotaxis transducer; K03406 methyl-accepting chemotaxis protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_19
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18921..19541
|
Acetyltransferase (GNAT) domain n=1 Tax=uncultured organism RepID=T1W8D3_9ZZZZ
N-acetyltransferase GCN5
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_20
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19695..19901
|
Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GT29_SPHAL
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:KGB58266.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19922..20128
|
Translation initiation factor IF-1 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZR2_9SPHN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_22
unknown
|
Not on your lists |
20209..20376
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1868_curated_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20414..20635
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAK6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80708.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20674..21105)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQX2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80709.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21210..21662
|
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQJ1_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:ENY80710.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MarR family transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_26
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21675..21923)
|
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22301..23278
|
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB80_9SPHN
2-nitropropane dioxygenase {ECO:0000313|EMBL:ENY80711.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_28
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23275..23748)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZR6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA09351.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23748..24545)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAK9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80713.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_1868_curated_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24626..26587)
|
Probable potassium transport system protein kup n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQX5_9SPHN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
K+ potassium transporter; K03549 KUP system potassium uptake protein
|