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SCNpilot_expt_500_p_scaffold_1624

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1624_1
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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168..881
DNA (714bp) protein (238aa)
resolvase n=1 Tax=Xanthomonas axonopodis RepID=UPI000011F174 rbh
Putative resolvase {ECO:0000313|EMBL:CCU56601.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitrificans (Alcaligenes denitrificans).;"
resolvase site-specific recombinase
SCNpilot_expt_500_p_scaffold_1624_2
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

878..1174
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PS47_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AHB06139.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1624_3
unknown

Not on your lists

1256..1444
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1624_4
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1487..2146
DNA (660bp) protein (220aa)
Plasmid segregation oscillating ATPase ParF n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUB4_ACICJ rbh
ATPase involved in chromosome partitioning-like protein; K03496 chromosome partitioning protein rbh
Plasmid segregation oscillating ATPase ParF {ECO:0000313|EMBL:ABQ29196.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_expt_500_p_scaffold_1624_5
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2161..2430
DNA (270bp) protein (90aa)
Plasmid segregation protein ParG n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMK5_9XANT
Plasmid segregation protein ParG {ECO:0000313|EMBL:CCF70435.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1624_6
unknown

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2473..2676
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1624_7
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2687..3556
DNA (870bp) protein (290aa)
TrfA family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VX05_POLNA rbh
TrfA family protein rbh
TrfA family protein {ECO:0000313|EMBL:ABM40183.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_expt_500_p_scaffold_1624_8
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4464..5375
DNA (912bp) protein (304aa)
KfrA protein n=1 Tax=Pseudomonas aeruginosa RepID=A7MAI0_PSEAI
KfrA protein {ECO:0000313|EMBL:AJW29861.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1624_9
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5372..5842
DNA (471bp) protein (157aa)
Putative endonuclease n=1 Tax=Thauera sp. 28 RepID=N6YFD0_9RHOO
nuclease
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_expt_500_p_scaffold_1624_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5935..6303)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1DQG5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AKH45393.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
SCNpilot_expt_500_p_scaffold_1624_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6318..8855)
DNA (2538bp) protein (846aa)
TraG n=1 Tax=Pseudomonas aeruginosa RepID=M1RSX5_PSEAI
TraG {ECO:0000313|EMBL:AGG19206.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
conjugal transfer protein TraG
SCNpilot_expt_500_p_scaffold_1624_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8889..9200)
DNA (312bp) protein (104aa)
MobC n=1 Tax=Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739 RepID=U6QUD7_SALET
Uncharacterized protein {ECO:0000313|EMBL:KJW76573.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
mobilization protein C
SCNpilot_expt_500_p_scaffold_1624_13
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9399..11459
DNA (2061bp) protein (687aa)
Mobilization protein n=1 Tax=Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1739 RepID=U6QQI3_SALET rbh
mobL; mobilization protein rbh
Mobilization protein {ECO:0000313|EMBL:ABI93471.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter; sp. (strain OCh 114)) (Roseobacter denitrificans).;"
SCNpilot_expt_500_p_scaffold_1624_14
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11527..11748
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN14_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFJ90151.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
SCNpilot_expt_500_p_scaffold_1624_15
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11735..12718
DNA (984bp) protein (328aa)
Trypsin domain-containing protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD6_PSEAI rbh
trypsin domain-containing protein
Trypsin domain protein {ECO:0000313|EMBL:AAU92378.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
SCNpilot_expt_500_p_scaffold_1624_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12855..13265)
DNA (411bp) protein (137aa)
DNA mismatch endonuclease vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
DNA mismatch endonuclease of very short patch repair n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A8A4_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI78380.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_500_p_scaffold_1624_17
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13262..14191)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Achromobacter denitrificans RepID=T2K1A2_ACHDE rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU56618.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitrificans (Alcaligenes denitrificans).;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_1624_18
Achromobacter denitrificans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14191..15339)
DNA (1149bp) protein (383aa)
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
HsdFM n=1 Tax=Achromobacter denitrificans RepID=T2K1C8_ACHDE rbh
HsdFM {ECO:0000313|EMBL:CCU56617.1}; TaxID=32002 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter denitrificans (Alcaligenes denitrificans).;"
SCNpilot_expt_500_p_scaffold_1624_19
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15332..15544)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q3BT38_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ24021.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
Displaying 19 items

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