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SCNpilot_expt_500_p_scaffold_8565

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_8565_1
unknown

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comp(3..239)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_8565_2
unknown

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comp(569..1333)
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_8565_3

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comp(1346..2020)
DNA (675bp) protein (225aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
Marine sediment metagenome DNA, contig: S06H3_S15113 {ECO:0000313|EMBL:GAI33148.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_p_scaffold_8565_4
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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2196..2987
DNA (792bp) protein (264aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJY0_9CHLR
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898
Tax=RBG_13_Spirochaetes_68_11_curated
SCNpilot_expt_500_p_scaffold_8565_5
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3000..4967)
DNA (1968bp) protein (656aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Alpha amylase catalytic region n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GD87_CHLAD rbh
Alpha amylase catalytic region {ECO:0000313|EMBL:ACL25154.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Displaying 5 items

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