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SCNpilot_expt_500_p_scaffold_11188

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_11188_1
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..238)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000370C383
Thioesterase {ECO:0000313|EMBL:KGO87267.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_11188_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(247..996)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364DDEE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU62438.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_p_scaffold_11188_3
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1049..1651)
DNA (603bp) protein (201aa)
Predicted transcriptional regulator, TetR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEH4_FLAJ1
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22474.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
TetR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_11188_4
unknown

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comp(1836..1955)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_11188_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1979..2827
DNA (849bp) protein (283aa)
short-chain dehydrogenase n=1 Tax=Pedobacter agri RepID=UPI000299F358 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ24146.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
3-oxoacyl-(acyl-carrier-protein) reductase rbh
SCNpilot_expt_500_p_scaffold_11188_6
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2877..3719
DNA (843bp) protein (281aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y3M4_9SPHI rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHQ30286.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
3-oxoacyl-ACP reductase rbh
SCNpilot_expt_500_p_scaffold_11188_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3800..4108
DNA (309bp) protein (103aa)
Transcriptional regulator, AraC family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJD7_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH54012.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transcriptional regulator, AraC family
Displaying 7 items

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