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SCNpilot_expt_500_p_scaffold_3420

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_3420_1
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..946
DNA (945bp) protein (315aa)
Copper-transporting ATPase CopA {ECO:0000313|EMBL:CEG54771.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CEG54771.1};; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
heavy metal-transporting ATPase (EC:3.6.3.-)
Heavy metal-transporting ATPase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2L3_ACIMA
SCNpilot_expt_500_p_scaffold_3420_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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999..2249
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000365F58B rbh
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_500_p_scaffold_3420_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2246..3508
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003627905 rbh
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_500_p_scaffold_3420_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3501..4208
DNA (708bp) protein (236aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K05685 macrolide transport system ATP-binding/permease protein [EC:3.6.3.-]
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036126B2 rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_500_p_scaffold_3420_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4246..4596
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003666A84
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_500_p_scaffold_3420_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4617..5132
DNA (516bp) protein (172aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ2_NITHX
MerR family transcriptional regulator
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53547.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_expt_500_p_scaffold_3420_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5122..5382
DNA (261bp) protein (87aa)
Glutaredoxin-like protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW8_9BRAD
Glutaredoxin-like protein {ECO:0000313|EMBL:EIG62874.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
thioredoxin/glutaredoxin
SCNpilot_expt_500_p_scaffold_3420_8
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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5384..6079
DNA (696bp) protein (232aa)
Putative Cytochrome c biogenesis protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA1_THIA3 rbh
putative Cytochrome c biogenesis protein rbh
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_expt_500_p_scaffold_3420_9
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6076..6321
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J3B1H5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KHK50634.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_3420_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6375..6572
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_expt_500_p_scaffold_3420_11
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6896..7219
DNA (324bp) protein (108aa)
ArsR family transcriptional regulator n=1 Tax=Burkholderia kururiensis RepID=UPI00034AD2D5
ArsR family transcriptional regulator {ECO:0000313|EMBL:EPX95978.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
ArsR family transcriptional regulator
SCNpilot_expt_500_p_scaffold_3420_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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7370..8443
DNA (1074bp) protein (358aa)
Arsenical-resistance protein ACR3 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CR5_DECAR rbh
arsenical-resistance protein ACR3; K03325 arsenite transporter, ACR3 family rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_expt_500_p_scaffold_3420_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8468..9325
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378F791 rbh
type 11 methyltransferase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_500_p_scaffold_3420_14
Neisseria sp. oral taxon 020, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9378..9815)
DNA (438bp) protein (146aa)
LysR substrate binding domain protein n=1 Tax=Neisseria sp. oral taxon 020 str. F0370 RepID=L1NVX6_9NEIS
LysR substrate binding domain protein {ECO:0000313|EMBL:EKY07322.1}; TaxID=1127694 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sp. oral taxon 020 str. F0370.;"
SCNpilot_expt_500_p_scaffold_3420_15
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9872..10720
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002F1CEAA
NAD(P)H steroid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Displaying 15 items

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