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SCNpilot_expt_500_p_scaffold_28957

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_28957_1
unknown

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comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_28957_2
unknown

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comp(923..1099)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_28957_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1568..1753
DNA (186bp) protein (62aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PJY9_9DELT
SCNpilot_expt_500_p_scaffold_28957_4
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1768..2130
DNA (363bp) protein (121aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZF1_9PLAN
SCNpilot_expt_500_p_scaffold_28957_5
unknown

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2157..2282
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_28957_6
Cladophialophora psammophila, Cladophialophora, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

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2341..2688
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Phytophthora ramorum RepID=H3H3D6_PHYRM
Uncharacterized protein {ECO:0000313|EMBL:EXJ70643.1}; TaxID=1182543 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Cladophialophora.;" source="Cladophialophora psammophila CBS 110553.;"
aconitate hydratase, putative
SCNpilot_expt_500_p_scaffold_28957_7
Albugo laibachii, Albugo, Albuginales, Eukaryota

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2654..2920
DNA (267bp) protein (89aa)
Putative uncharacterized protein ALNC14_096690 n=1 Tax=Albugo laibachii Nc14 RepID=F0WQB7_9STRA
Putative uncharacterized protein ALNC14_096690 {ECO:0000313|EMBL:CCA23525.1}; TaxID=890382 species="Eukaryota; Stramenopiles; Oomycetes; Albuginales; Albuginaceae; Albugo.;" source="Albugo laibachii Nc14.;"
aconitate hydratase, putative
SCNpilot_expt_500_p_scaffold_28957_8
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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2993..3322
DNA (330bp) protein (110aa)
3-isopropylmalate dehydrogenase {ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|RuleBase:RU004445};; TaxID=747089 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL; 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices).;"
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9SNX6_RHIID
aconitate hydratase, putative
SCNpilot_expt_500_p_scaffold_28957_9
unknown

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comp(3195..3494)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying 9 items

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