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SCNpilot_expt_500_p_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 231 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_23_1
R_Chlamydiae_49_9, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3..491
DNA (489bp) protein (163aa)
Metallophosphoesterase id=4838432 bin=GWC2_Chlamydiae_50_10 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
metallophosphoesterase
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_9_curated
SCNpilot_expt_500_p_scaffold_23_2
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(658..1299)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R437_9CHLA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB86511.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
SCNpilot_expt_500_p_scaffold_23_3
unknown

Not on your lists

1843..2493
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_23_4
R_Chlamydiae_27_8, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2622..3800
DNA (1179bp) protein (393aa)
Putative uncharacterized protein id=2180039 bin=GWE2_TM6_42_60 species=GWE2_TM6_42_60 genus=GWE2_TM6_42_60 taxon_order=GWE2_TM6_42_60 taxon_class=GWE2_TM6_42_60 phylum=TM6 tax=GWE2_TM6_42_60 organism_group=TM6 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_27_8_curated
SCNpilot_expt_500_p_scaffold_23_5
Holospora undulata, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3793..4536
DNA (744bp) protein (248aa)
short-chain dehydrogenase n=2 Tax=Holospora undulata RepID=UPI0003C52017
Putative oxidoreductase {ECO:0000313|EMBL:ETZ04938.1}; TaxID=1321371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora undulata HU1.;"
short chain dehydrogenase
SCNpilot_expt_500_p_scaffold_23_6
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

4533..4781
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RBG2_9CHLA id=11466 bin=ACD17 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
aacA; Aminoglycoside N(6')acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
SCNpilot_expt_500_p_scaffold_23_7

Not on your lists

4831..5028
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DQJ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE08201.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aacA; Aminoglycoside N(6')acetyltransferase
SCNpilot_expt_500_p_scaffold_23_8
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

5025..5978
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KX00_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDR34211.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_23_9
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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6030..6674
DNA (645bp) protein (215aa)
Virginiamycin A acetyltransferase {ECO:0000313|EMBL:KIC73183.1}; EC=2.3.1.- {ECO:0000313|EMBL:KIC73183.1};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
Probable streptogramin A acetyltransferase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDV6_PARUW rbh
vatB; streptogramin A acetyltransferase rbh
SCNpilot_expt_500_p_scaffold_23_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6667..8160
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L0H9_PARAV
Fructosamine-3-kinase {ECO:0000313|EMBL:CDZ81261.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_23_11
unknown

Not on your lists

comp(8191..8349)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_23_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8456..10171)
DNA (1716bp) protein (572aa)
IQ calmodulin-binding motif {ECO:0000313|EMBL:CDZ81406.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_23_13
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

11003..12391
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9G2_9CHLA
Outer membrane efflux protein {ECO:0000313|EMBL:CDR35298.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_23_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

12388..13890
DNA (1503bp) protein (501aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZZ7_PARAV
Copper resistance protein A {ECO:0000313|EMBL:CDZ81811.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_23_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14045..14275
DNA (231bp) protein (77aa)
Microcin C7 self-immunity protein MccF {ECO:0000313|EMBL:CDZ81245.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_23_16
unknown

Not on your lists

14440..14589
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_23_17
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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14541..15020
DNA (480bp) protein (160aa)
aroE; shikimate biosynthesis protein AroDE; K13832 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FAZ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC72371.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
SCNpilot_expt_500_p_scaffold_23_18
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15008..15568
DNA (561bp) protein (187aa)
lpp:plpp0069 hypothetical protein id=11576 bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
bifunctional deaminase-reductase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
SCNpilot_expt_500_p_scaffold_23_19
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15668..17425
DNA (1758bp) protein (586aa)
thiamine ABC transporter permease n=1 Tax=Paenibacillus elgii RepID=UPI000248CFC7 rbh
Putative multidrug export ATP-binding/permease protein {ECO:0000313|EMBL:CDZ81822.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_expt_500_p_scaffold_23_20
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17409..18419
DNA (1011bp) protein (337aa)
Spectinomycin phosphotransferase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZU6_PARAV
spectinomycin phosphotransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_expt_500_p_scaffold_23_21
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18540..19136
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7K3_9CHLA id=12603 bin=ACD17 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
GNAT family acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
SCNpilot_expt_500_p_scaffold_23_22
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19313..21727
DNA (2415bp) protein (805aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] rbh
Phosphoenolpyruvate synthase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A7Z4_THEID rbh
SCNpilot_expt_500_p_scaffold_23_23
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21877..22527
DNA (651bp) protein (217aa)
Putative phosphoribosyl transferase Rv0571c/MT0597 n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L1H0_PARAV rbh
phosphoribosyl transferase Rv0571c/MT0597 rbh
Putative phosphoribosyl transferase Rv0571c/MT0597 {ECO:0000313|EMBL:CCB87112.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
SCNpilot_expt_500_p_scaffold_23_24
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22524..23495
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAD1_9CHLA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA77232.1}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
hypothetical protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) rbh
SCNpilot_expt_500_p_scaffold_23_25
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(23646..24647)
DNA (1002bp) protein (334aa)
D-lactate dehydrogenase (EC:1.1.1.28); K03778 D-lactate dehydrogenase [EC:1.1.1.28] rbh
D-lactate dehydrogenase n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZID2_9PROT rbh
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
SCNpilot_expt_500_p_scaffold_23_26
unknown

Not on your lists

comp(25068..25211)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_23_27
unknown

Not on your lists

comp(25223..26104)
DNA (882bp) protein (294aa)
phosphoglycerate mutase
SCNpilot_expt_500_p_scaffold_23_28
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

Not on your lists

comp(26357..27574)
DNA (1218bp) protein (406aa)
Chromosome undetermined scaffold_52, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0DJ01_PARTE
hypothetical protein
Chromosome undetermined scaffold_52, whole genome shotgun sequence {ECO:0000313|EMBL:CAK83018.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium.;" source="Paramecium tetraurelia.;"
SCNpilot_expt_500_p_scaffold_23_29

Not on your lists

27820..28224
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT91733.1}; TaxID=1618914 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_13.;"
Cupin region id=1262129 bin=GWE1_Burkholderiales_65_30 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
mannose-6-phosphate isomerase
SCNpilot_expt_500_p_scaffold_23_30
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

28249..30987
DNA (2739bp) protein (913aa)
Putative calcium-transporting ATPase {ECO:0000313|EMBL:CDR34832.1}; EC=3.6.3.8 {ECO:0000313|EMBL:CDR34832.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
pacL; putative calcium-transporting ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] rbh
Putative calcium-transporting ATPase id=4712655 bin=GWC2_Chlamydiae_50_10 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good + rbh
Displaying items 1-30 of 231 in total

View Taxonomy