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SCNpilot_expt_500_p_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 339 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_38_1
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3..788)
DNA (786bp) protein (262aa)
Ribosomal RNA large subunit methyltransferase I {ECO:0000313|EMBL:KIC73655.1}; EC=2.1.1.191 {ECO:0000313|EMBL:KIC73655.1};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rlmI; ribosomal RNA large subunit methyltransferase I; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R577_9CHLA
SCNpilot_expt_500_p_scaffold_38_2
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(803..1177)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6YGZ7_9ALTE
UPF0382 membrane protein YwdK {ECO:0000313|EMBL:KIC73656.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_38_3
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

1261..1788
DNA (528bp) protein (176aa)
hypothetical protein; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R580_9CHLA
Uncharacterized protein {ECO:0000313|EMBL:KIA77870.1}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
SCNpilot_expt_500_p_scaffold_38_4
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

1797..2849
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAU8_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC73767.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_38_5
unknown

Not on your lists

comp(2889..3011)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_38_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3108..4193)
DNA (1086bp) protein (362aa)
Na+/Ca+ antiporter, CaCA family n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USC0_ROSS1 rbh
CaCA family Na(+)/Ca(+) antiporter; K07301 inner membrane protein rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
SCNpilot_expt_500_p_scaffold_38_7
unknown

Not on your lists

4340..6100
DNA (1761bp) protein (587aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_38_8
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6109..7503)
DNA (1395bp) protein (465aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
DLD; dihydrolipoyl dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ59_PARAV rbh
SCNpilot_expt_500_p_scaffold_38_9
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7543..8730)
DNA (1188bp) protein (396aa)
sucB; dihydrolipoyLLysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] rbh
DihydrolipoyLLysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex {ECO:0000313|EMBL:CCB86181.1}; EC=2.3.1.61 {ECO:0000313|EMBL:CCB86181.1};; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
DihydrolipoyLLysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZ58_PARAV rbh
SCNpilot_expt_500_p_scaffold_38_10
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8744..11497)
DNA (2754bp) protein (918aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:CCB86180.1}; EC=1.2.4.2 {ECO:0000313|EMBL:CCB86180.1};; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
sucA; 2-oxoglutarate dehydrogenase E1; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] rbh
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ57_PARAV rbh
SCNpilot_expt_500_p_scaffold_38_11
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

11668..12411
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZ56_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC73504.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_38_12
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

12408..14990
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ55_PARAV rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC76505.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_38_13
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(15072..16877)
DNA (1806bp) protein (602aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC76503.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
SCNpilot_expt_500_p_scaffold_38_14
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(17035..17895)
DNA (861bp) protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC73508.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
SCNpilot_expt_500_p_scaffold_38_15
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18139..20226
DNA (2088bp) protein (696aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4J2_9CHLA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC73509.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_38_16
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20510..20998
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L060_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC73510.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_38_17
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20988..22151
DNA (1164bp) protein (388aa)
Oxygen-independent coproporphyrinogen-III oxidase 1 {ECO:0000313|EMBL:KIC73511.1}; EC=1.3.99.22 {ECO:0000313|EMBL:KIC73511.1};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Putative oxygen-independent coproporphyrinogen III oxidase, hemN n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MC79_PARUW rbh
SCNpilot_expt_500_p_scaffold_38_18
unknown

Not on your lists

comp(22210..23145)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_38_19
unknown

Not on your lists

comp(23323..24744)
DNA (1422bp) protein (474aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_38_20
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(24769..25485)
DNA (717bp) protein (239aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MC76_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC73512.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
SCNpilot_expt_500_p_scaffold_38_21
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(25494..26534)
DNA (1041bp) protein (347aa)
hypothetical protein; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] rbh
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L064_PARAV rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC76497.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
SCNpilot_expt_500_p_scaffold_38_22
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(26686..27261)
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC73514.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
SCNpilot_expt_500_p_scaffold_38_23
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

27323..28117
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCQ6_PARUW
UPF0066 protein {ECO:0000313|EMBL:KIC76494.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_38_24
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

28195..29388
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KWU0_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC76493.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_38_25
unknown

Not on your lists

29584..30546
DNA (963bp) protein (321aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_38_26
unknown

Not on your lists

30776..31228
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_38_27
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(31347..32363)
DNA (1017bp) protein (339aa)
Putative spermidine/putrescine-binding protein, component of ABC transporter system n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCV1_PARUW rbh
Spermidine/putrescine-binding periplasmic protein 2 {ECO:0000313|EMBL:KIC73457.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
potD; spermidine/putrescine-binding protein , component of ABC transporter system; K11069 spermidine/putrescine transport system substrate-binding protein rbh
SCNpilot_expt_500_p_scaffold_38_28
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(32390..33157)
DNA (768bp) protein (256aa)
Probable spermidine/putrescine transport system permease, component of ATP-transporter system n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCV2_PARUW rbh
Spermidine/putrescine transport system permease protein PotC {ECO:0000313|EMBL:KIC76526.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
potC; spermidine/putrescine ABC transporter permease; K11070 spermidine/putrescine transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_38_29
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(33154..34026)
DNA (873bp) protein (291aa)
Probable spermidine/putrescine transport system permease, component of ATP-transporter system n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCV3_PARUW rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:KIC76525.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
potB; spermidine/putrescine ABC transporter permease; K11071 spermidine/putrescine transport system permease protein rbh
SCNpilot_expt_500_p_scaffold_38_30
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(34030..35160)
DNA (1131bp) protein (377aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726, ECO:0000256|SAAS:SAAS00035095};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
potA; sperimidine/putrescine ABC transporter ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] rbh
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=POTA_PARUW rbh
Displaying items 1-30 of 339 in total

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