ggKbase home page

SCNpilot_expt_500_p_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 195 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_72_1
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2..385
DNA (384bp) protein (128aa)
Ribosomal RNA large subunit methyltransferase I {ECO:0000313|EMBL:KIC73655.1}; EC=2.1.1.191 {ECO:0000313|EMBL:KIC73655.1};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
rlmI; ribosomal RNA large subunit methyltransferase I; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R577_9CHLA
SCNpilot_expt_500_p_scaffold_72_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

566..709
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=B2UJ85_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS64737.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
SCNpilot_expt_500_p_scaffold_72_3
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

756..1826
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Bacillus sp. m3-13 RepID=UPI0001E89FE4
UPF0118 membrane protein YueF {ECO:0000313|EMBL:KIC73654.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_72_4
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2123..2731
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KWS4_PARAV
Uncharacterized protein {ECO:0000313|EMBL:KIC76485.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_72_5
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2795..3232
DNA (438bp) protein (146aa)
General stress protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TUT2_BACAO
Uncharacterized protein {ECO:0000313|EMBL:KIC76486.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_72_6
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3238..3843
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC76487.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
SCNpilot_expt_500_p_scaffold_72_7
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3846..4283
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC76488.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
SCNpilot_expt_500_p_scaffold_72_8
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4330..6318)
DNA (1989bp) protein (663aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
acs; acetyl-coenzyme A synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
Acetyl-coenzyme A synthetase n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YWB2_WADCW rbh
SCNpilot_expt_500_p_scaffold_72_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6410..7372
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D6D8_SINAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA24827.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_expt_500_p_scaffold_72_10
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7490..8005)
DNA (516bp) protein (172aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
ppiB; peptidyl-prolyl cis-trans isomerase B; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YWB6_WADCW
SCNpilot_expt_500_p_scaffold_72_11
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8029..9447)
DNA (1419bp) protein (473aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCS9_PARUW rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC76438.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_72_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10802..11098)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBB2_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ81305.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_72_13
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

comp(11085..11387)
DNA (303bp) protein (101aa)
Putative uncharacterized protein id=2727029 bin=GWF2_Melainabacteria_37_15 species=Rickettsia rhipicephali genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein
Tax=GWF2_Melainabacteria_37_15_curated
SCNpilot_expt_500_p_scaffold_72_14
unknown

Not on your lists

11712..11909
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_72_15
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11946..12254)
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC72304.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
Putative uncharacterized protein id=4330563 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
hypothetical protein
SCNpilot_expt_500_p_scaffold_72_16
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12238..12489)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EIK3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIC72303.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_72_17
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

13139..14545
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCJ4_PARUW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC72017.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
SCNpilot_expt_500_p_scaffold_72_18
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(14633..14962)
DNA (330bp) protein (110aa)
Putative membrane protein n=2 Tax=Waddlia chondrophila RepID=D6YWB8_WADCW
Putative membrane protein {ECO:0000313|EMBL:KIC76439.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_72_19
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(14974..15693)
DNA (720bp) protein (240aa)
Putative carboxymethylenebutenolidase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MC82_PARUW
Putative carboxymethylenebutenolidase {ECO:0000313|EMBL:KIC73635.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
ysgA; carboxymethylenebutenolidase
SCNpilot_expt_500_p_scaffold_72_20
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15917..16663
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZW6_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80627.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein; K09797 hypothetical protein
SCNpilot_expt_500_p_scaffold_72_21
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

16656..17081
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCJ6_PARUW
Group 2 truncated hemoglobin YjbI {ECO:0000313|EMBL:KIC76441.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein; K06886 hemoglobin
SCNpilot_expt_500_p_scaffold_72_22
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

17149..19377
DNA (2229bp) protein (743aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCK1_PARUW rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC73632.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein; K06959 uncharacterized protein rbh
SCNpilot_expt_500_p_scaffold_72_23
unknown

Not on your lists

19692..19889
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_72_24
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20032..21339
DNA (1308bp) protein (436aa)
3-deoxy-D-manno-octulosonic acid transferase {ECO:0000313|EMBL:KIC73631.1}; EC=2.4.99.12 {ECO:0000313|EMBL:KIC73631.1};; EC=2.4.99.13 {ECO:0000313|EMBL:KIC73631.1};; EC=2.4.99.14 {ECO:0000313|EMBL:KIC73631.1};; EC=2.4.99.15 {ECO:0000313|EMBL:KIC73631.1};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
gseA; KDO transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] rbh
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LDN3_9CHLA rbh
SCNpilot_expt_500_p_scaffold_72_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

21727..22722
DNA (996bp) protein (332aa)
Aldo/keto reductase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QWE5_CHLT3 rbh
Predicted oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:CDM66704.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
aldo/keto reductase rbh
SCNpilot_expt_500_p_scaffold_72_26
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(22780..23838)
DNA (1059bp) protein (353aa)
ampC-B; beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6] rbh
Beta-lactamase {ECO:0000313|EMBL:KIA78219.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KIA78219.1};; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
Beta-lactamase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYV4_PARAV rbh
SCNpilot_expt_500_p_scaffold_72_27
unknown

Not on your lists

24146..25873
DNA (1728bp) protein (576aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_72_28
unknown

Not on your lists

25908..26030
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_72_29
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

26051..26674
DNA (624bp) protein (208aa)
phosphate transport regulator; K07220 hypothetical protein id=14425098 bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
phosphate transport regulator; K07220 hypothetical protein
Tax=CSP1_2_Dadabacteria
SCNpilot_expt_500_p_scaffold_72_30
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26676..27698
DNA (1023bp) protein (341aa)
Probable low-affinity inorganic phosphate transporter n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YEX0_9DELT rbh
Probable low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:CBX29114.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
pit; low-affinity inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family rbh
Displaying items 1-30 of 195 in total

View Taxonomy