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SCNpilot_expt_500_p_scaffold_553

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_553_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

3..752
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB67_FLUTR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_expt_500_p_scaffold_553_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

927..1337
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037688D4
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EFK36950.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
transcriptional regulator, badm/rrf2 family
SCNpilot_expt_500_p_scaffold_553_3
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1393..2247
DNA (855bp) protein (285aa)
Male sterility domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7X4_PEDSD rbh
NAD(P)H:quinone oxidoreductase {ECO:0000313|EMBL:CDS95862.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
Male sterility domain-containing protein rbh
SCNpilot_expt_500_p_scaffold_553_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2346..2765
DNA (420bp) protein (140aa)
Phenylacetic acid degradation-related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICR1_FLUTR
phenylacetic acid degradation-like protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_5
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

2726..3730
DNA (1005bp) protein (335aa)
Chorismate-binding domain-containing protein; K02361 isochorismate synthase [EC:5.4.4.2]
Chorismate binding domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICR0_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_500_p_scaffold_553_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(3766..4023)
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_500_p_scaffold_553_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4157..4603
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBQ9_FLUTR
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA45385.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_p_scaffold_553_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4605..7025
DNA (2421bp) protein (807aa)
TonB-dependent receptor n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBR0_FLUTR rbh
TonB-dependent receptor rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_9
unknown

Not on your lists

comp(7022..7186)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_553_10
unknown

Not on your lists

comp(7621..8481)
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_553_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(8514..11144)
DNA (2631bp) protein (877aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
Valine--tRNA ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC97_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11289..13343)
DNA (2055bp) protein (685aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE6_FLUTR
OmpA/MotB domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13407..14759)
DNA (1353bp) protein (451aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] rbh
Dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:AEA44632.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AEA44632.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE7_FLUTR rbh
SCNpilot_expt_500_p_scaffold_553_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14836..16791)
DNA (1956bp) protein (652aa)
Glycosyl transferase family 2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE8_FLUTR rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA44633.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_p_scaffold_553_15
unknown

Not on your lists

comp(16792..17292)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_553_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17292..17669)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE9_FLUTR
endoribonuclease L-PSP; K07567 TdcF protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEA44634.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_p_scaffold_553_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17796..18362
DNA (567bp) protein (189aa)
trpG; anthranilate synthase component II (glutamine amidotransferase) (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27]
Anthranilate synthase component II n=1 Tax=Imtechella halotolerans K1 RepID=I0WGZ7_9FLAO
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18424..18864
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFF5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44640.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_p_scaffold_553_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18977..20386
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDS7_FLUTR rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_20
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20393..21253
DNA (861bp) protein (287aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAW5_FLUTR rbh
Beta-lactamase {ECO:0000313|EMBL:KJS04177.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
metallo-beta-lactamase superfamily protein rbh
SCNpilot_expt_500_p_scaffold_553_21
unknown

Not on your lists

21296..21703
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_553_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21725..22225)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEQ0_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_23
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(22233..23861)
DNA (1629bp) protein (543aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
Carboxyl-terminal protease n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEP9_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_500_p_scaffold_553_24
unknown

Not on your lists

23972..24424
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_553_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24414..25199
DNA (786bp) protein (262aa)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_26
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

25201..25539
DNA (339bp) protein (113aa)
Translation initiation factor 1 (EIF-1/SUI1) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA81_FLUTR
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_expt_500_p_scaffold_553_27
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25590..26765
DNA (1176bp) protein (392aa)
SAM-dependent methyltransferase (EC:2.1.1.-); K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:AEA45555.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEA45555.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SAM-dependent methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDZ1_FLUTR rbh
SCNpilot_expt_500_p_scaffold_553_28
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26834..27610)
DNA (777bp) protein (259aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] rbh
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICP9_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27615..29012)
DNA (1398bp) protein (466aa)
3-hydroxyacyl-(acyl-carrier-protein) dehydratase (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] rbh
3-hydroxyacyl-(Acyl-carrier-protein) dehydratase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICQ0_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_500_p_scaffold_553_30
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29005..30057)
DNA (1053bp) protein (351aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] rbh
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICQ1_FLUTR rbh
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying items 1-30 of 40 in total

View Taxonomy