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SCNpilot_expt_500_p_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 169 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_65_1
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..2362)
DNA (2361bp) protein (787aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIF1_FLUTR rbh
PKD domain-containing protein rbh
PKD domain containing protein {ECO:0000313|EMBL:AEA44877.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_p_scaffold_65_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2576..4831)
DNA (2256bp) protein (752aa)
(p)ppGpp synthetase I SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5] rbh
MFS transporter n=1 Tax=Niabella aurantiaca RepID=UPI0003703A91 rbh
(P)ppGpp synthase {ECO:0000313|EMBL:GAO45016.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_expt_500_p_scaffold_65_3
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4992..5894)
DNA (903bp) protein (301aa)
Putative uncharacterized protein id=3773265 bin=GWF2_Bacteroidetes_43_63 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
membrane protein
Tax=GWA2_Bacteroidetes_30_7_curated
SCNpilot_expt_500_p_scaffold_65_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5925..7961)
DNA (2037bp) protein (679aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9B9_FLUTR
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEA44076.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_p_scaffold_65_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8344..9732
DNA (1389bp) protein (463aa)
trigger factor n=1 Tax=Niabella aurantiaca RepID=UPI00036A4FDF rbh
Trigger factor {ECO:0000313|EMBL:AHF15173.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
trigger factor; K03545 trigger factor rbh
SCNpilot_expt_500_p_scaffold_65_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10031..10726
DNA (696bp) protein (232aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ATP-dependent Clp protease proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ78_9SPHI rbh
SCNpilot_expt_500_p_scaffold_65_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10757..11380
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
Clp protease proteolytic subunit ClpP n=1 Tax=Niabella aurantiaca RepID=UPI00036DC592 rbh
SCNpilot_expt_500_p_scaffold_65_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11522..12763
DNA (1242bp) protein (414aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE6_NIAKG rbh
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_65_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12868..13014
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJ81_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17052.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_500_p_scaffold_65_10
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13487..13735
DNA (249bp) protein (83aa)
GIY-YIG nuclease superfamily protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NA76_9BACT
GIY-YIG nuclease superfamily protein {ECO:0000313|EMBL:EMR04162.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
Excinuclease ABC, C subunit N-terminal region; K07461 putative endonuclease
SCNpilot_expt_500_p_scaffold_65_11
unknown

Not on your lists

13955..15682
DNA (1728bp) protein (576aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_65_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15783..16424)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM56_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17281.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_500_p_scaffold_65_13
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16640..17185)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8ULB4_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW19902.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_expt_500_p_scaffold_65_14
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17190..21392)
DNA (4203bp) protein (1401aa)
Rhs family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH31_9SPHI rbh
Rhs family protein {ECO:0000313|EMBL:EDM35112.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
RHS repeat-associated core domain-containing protein
SCNpilot_expt_500_p_scaffold_65_15
unknown

Not on your lists

comp(21424..21738)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_65_16
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21748..23127)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH33_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM35114.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_65_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23134..24927)
DNA (1794bp) protein (598aa)
Rhs element Vgr protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNI4_9SPHI rbh
Type IV secretion protein Rhs {ECO:0000313|EMBL:AHF15272.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Rhs element Vgr protein rbh
SCNpilot_expt_500_p_scaffold_65_18
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25021..26187)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIH3_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51516.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_500_p_scaffold_65_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26220..26699)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTS5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15641.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_65_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26712..27104)
DNA (393bp) protein (131aa)
phage tail protein n=1 Tax=Niabella aurantiaca RepID=UPI00036B3D07
Phage tail protein {ECO:0000313|EMBL:AHF15642.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_65_21
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27294..28619)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 336 str. F0502 RepID=S3BEQ6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD97785.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 336 str. F0502.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_65_22
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28635..29084)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XBH7_FLACA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF09761.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
SCNpilot_expt_500_p_scaffold_65_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29292..30341)
DNA (1050bp) protein (350aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR30_NIAKG rbh
PKD domain-containing protein rbh
PKD domain containing protein {ECO:0000313|EMBL:AEV98944.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_65_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30443..31078
DNA (636bp) protein (212aa)
NLP/P60 protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTT4_9SPHI
NLP/P60 protein; K13694 lipoprotein Spr
NLP/P60 protein {ECO:0000313|EMBL:AEV98945.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_65_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31065..31589)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR32_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98946.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_65_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31616..32788)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR33_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV98947.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_p_scaffold_65_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32806..33678)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E4278 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF15649.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_65_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33711..34634)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTT8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17652.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_65_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34639..36498)
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379307D rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17653.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_65_30
unknown

Not on your lists

36537..36893
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying items 1-30 of 169 in total

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