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SCNpilot_expt_500_p_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_44_1
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1854)
DNA (1854bp) protein (618aa)
endoglucanase-like protein (EC:3.2.1.-); K01238 [EC:3.2.1.-] rbh
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003653399
Uncharacterized protein {ECO:0000313|EMBL:EYR66578.1}; Flags: Fragment;; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_expt_500_p_scaffold_44_2
unknown

Not on your lists

comp(1867..2580)
DNA (714bp) protein (238aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_44_3
unknown

Not on your lists

3188..3457
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_44_4
unknown

Not on your lists

3475..3864
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_44_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3911..4879
DNA (969bp) protein (323aa)
Mg2+ transporter protein, CorA-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBI7_NITMU rbh
CorA-like Mg2+ transporter protein; K03284 magnesium transporter rbh
Mg2+ transporter protein, CorA-like protein {ECO:0000313|EMBL:ABB73884.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_expt_500_p_scaffold_44_6
unknown

Not on your lists

comp(5042..6475)
DNA (1434bp) protein (478aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_44_7
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6685..7245)
DNA (561bp) protein (187aa)
Lipocalin-like protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XEQ1_9BURK
Lipocalin-like protein {ECO:0000313|EMBL:EFF74578.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Outer membrane lipoprotein
SCNpilot_expt_500_p_scaffold_44_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7242..8327)
DNA (1086bp) protein (362aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ9_9GAMM rbh
Type 11 methyltransferase {ECO:0000313|EMBL:EIL92000.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methyltransferase, cyclopropane fatty acid synthase rbh
SCNpilot_expt_500_p_scaffold_44_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8324..9106)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR0_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_500_p_scaffold_44_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9103..9639)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003629A4B
Uncharacterized protein {ECO:0000313|EMBL:EYR67189.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_44_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9639..10919)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B548C rbh
methyltransferase, cyclopropane fatty acid synthase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_500_p_scaffold_44_12
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10916..11698)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR3_9GAMM
NODE_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96818.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_44_13
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11695..12972)
DNA (1278bp) protein (426aa)
Amine oxidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VII3_9GAMM
putative NAD/FAD-binding protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_500_p_scaffold_44_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12969..13907)
DNA (939bp) protein (313aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHT1_9GAMM
fatty-acid desaturase
Fatty-acid desaturase {ECO:0000313|EMBL:AGG87381.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_44_15
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13973..14725)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031EB087
Uncharacterized protein {ECO:0000313|EMBL:KGQ20571.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_44_16
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14722..15294)
DNA (573bp) protein (191aa)
RNA polymerase sigma factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH46_PHEZH
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_500_p_scaffold_44_17
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15430..16209)
DNA (780bp) protein (260aa)
Putative secreted protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SWV9_ALCXX
Putative secreted protein {ECO:0000313|EMBL:EGP47296.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_44_18
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16535..17008
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3498F
Uncharacterized protein {ECO:0000313|EMBL:KGO98126.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_44_19
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17026..18813
DNA (1788bp) protein (596aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036578C7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN47770.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
SCNpilot_expt_500_p_scaffold_44_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18972..19451
DNA (480bp) protein (160aa)
GCN5 family acetyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI0003451C0D
Acetyltransferase {ECO:0000313|EMBL:EIL95455.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
SCNpilot_expt_500_p_scaffold_44_21
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19645..20574
DNA (930bp) protein (310aa)
Putative outer membrane protein B OmpB n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3C3_9BRAD
Putative outer membrane protein B OmpB {ECO:0000313|EMBL:CCE00950.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_44_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20714..21307
DNA (594bp) protein (198aa)
endonuclease n=1 Tax=Rudaea cellulosilytica RepID=UPI000368F2DE rbh
Restriction endonuclease {ECO:0000313|EMBL:EIM00747.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
restriction endonuclease
SCNpilot_expt_500_p_scaffold_44_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21635..23533
DNA (1899bp) protein (633aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK9_9GAMM
SCNpilot_expt_500_p_scaffold_44_24
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23598..24779)
DNA (1182bp) protein (394aa)
OmpA/MotB domain protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YTQ1_DESAF
Uncharacterized protein {ECO:0000313|EMBL:KFN51156.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
OmpA/MotB domain-containing protein
SCNpilot_expt_500_p_scaffold_44_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25103..25948)
DNA (846bp) protein (282aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophom
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] rbh
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B0B5
SCNpilot_expt_500_p_scaffold_44_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25962..30182)
DNA (4221bp) protein (1407aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F3DB5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02468.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_44_27
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

30367..31455
DNA (1089bp) protein (363aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
SCNpilot_expt_500_p_scaffold_44_28
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

31589..32665
DNA (1077bp) protein (359aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
SCNpilot_expt_500_p_scaffold_44_29
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32759..34048)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003682541
ATP/ADP translocase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_500_p_scaffold_44_30
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34128..34931
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E7BDB rbh
Sulfurase {ECO:0000313|EMBL:KGM53318.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
MOSC domain-containing protein; K07140
Displaying items 1-30 of 176 in total

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