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SCNpilot_expt_500_p_scaffold_151

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_151_1
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102..1502)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003608FE2 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK43896.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_151_2
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1553..3100)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003814D24 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK43897.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_151_3
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3979..6813
DNA (2835bp) protein (945aa)
Histidine kinase id=2863049 bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter fulvus genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
putative two-component system sensor kinase/response regulator fusion protein with GGDEF signalling domain
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_expt_500_p_scaffold_151_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7274..7681
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745DF5
Uncharacterized protein {ECO:0000313|EMBL:EYR70391.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
SCNpilot_expt_500_p_scaffold_151_5
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7749..8510
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382BD4C
Uncharacterized protein {ECO:0000313|EMBL:KFN48157.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
lipoprotein
SCNpilot_expt_500_p_scaffold_151_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8624..8983
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C3AE9
Uncharacterized protein {ECO:0000313|EMBL:EIL94908.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_151_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9134..9736
DNA (603bp) protein (201aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDB4_9GAMM
Methyltransferase {ECO:0000313|EMBL:AHX13935.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
methyltransferase family protein
SCNpilot_expt_500_p_scaffold_151_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9976..11907)
DNA (1932bp) protein (644aa)
Outer membrane adhesin like proteiin n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5U7_LEPCP
Uncharacterized protein {ECO:0000313|EMBL:KGM32432.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
outer membrane adhesin-like protein
SCNpilot_expt_500_p_scaffold_151_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12419..15034)
DNA (2616bp) protein (872aa)
transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000374648B
Transcriptional regulator {ECO:0000313|EMBL:KGQ17969.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
transcriptional regulator domain-containing protein
SCNpilot_expt_500_p_scaffold_151_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15239..18127)
DNA (2889bp) protein (963aa)
RNA polymerase-associated protein RapA {ECO:0000256|SAAS:SAAS00017181}; EC=3.6.4.- {ECO:0000256|SAAS:SAAS00017178};; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
helicase SNF2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA934
DNA/RNA helicase, superfamily II, SNF2 family
SCNpilot_expt_500_p_scaffold_151_11
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18229..18462)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6D797
Uncharacterized protein {ECO:0000313|EMBL:KFN43405.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_151_12
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18459..20534)
DNA (2076bp) protein (692aa)
Carbon starvation protein A n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091X0_STIAD rbh
Carbon starvation protein A {ECO:0000313|EMBL:KGQ18660.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
cstA; carbon starvation protein A; K06200 carbon starvation protein rbh
SCNpilot_expt_500_p_scaffold_151_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20723..21145)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPA4_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26077.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_expt_500_p_scaffold_151_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21429..21800
DNA (372bp) protein (124aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CBE3A
Stenotrophomonas maltophilia strain ZBG7B contig_35, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86222.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_expt_500_p_scaffold_151_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22088..23293
DNA (1206bp) protein (402aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:GAN45235.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
RNA methylase id=2738201 bin=GWF1_Xanthomonadales_69_6 species=Ectothiorhodospira sp. PHS-1 genus=Ectothiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
SCNpilot_expt_500_p_scaffold_151_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23406..24284
DNA (879bp) protein (293aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CC980
SCNpilot_expt_500_p_scaffold_151_17
unknown

Not on your lists

comp(24306..24986)
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_151_18
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25108..25701)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YEU1_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC16687.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola lipolytica E3.;"
ECF subfamily RNA polymerase sigma-24 factor
SCNpilot_expt_500_p_scaffold_151_19
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26191..27207)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377640D rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
magnesium Mg(2+) and cobalt Co(2+) transport protein CorA; K03284 magnesium transporter
SCNpilot_expt_500_p_scaffold_151_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27420..28436)
DNA (1017bp) protein (339aa)
NADPH:quinone reductase n=4 Tax=Pseudomonas aeruginosa RepID=V5SU64_PSEAI rbh
NADPH:quinone reductase {ECO:0000313|EMBL:AHB54652.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
NADPH:quinone reductase rbh
SCNpilot_expt_500_p_scaffold_151_21
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28465..29559)
DNA (1095bp) protein (365aa)
nemA2; flavoprotein NADH-dependent oxidoreductase (EC:1.-.-.-); K10680 N-ethylmaleimide reductase [EC:1.-.-.-] rbh
Flavoprotein NADH-dependent oxidoreductase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NVU7_CHRVO rbh
N-ethylmaleimide reductase {ECO:0000313|EMBL:KJH66509.1}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
SCNpilot_expt_500_p_scaffold_151_22
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29626..30021)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DIW5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM16757.1}; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_151_23
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30139..31050
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI000367FDB3 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EZH84315.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
LysR family transcriptional regulator rbh
SCNpilot_expt_500_p_scaffold_151_24
unknown

Not on your lists

comp(31209..32456)
DNA (1248bp) protein (416aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_151_25
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32711..34756
DNA (2046bp) protein (682aa)
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SDG6_HAHCH rbh
signal transduction protein rbh
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain {ECO:0000313|EMBL:ABC31308.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCNpilot_expt_500_p_scaffold_151_26
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35065..35847)
DNA (783bp) protein (261aa)
ABC-type amino acid transport/signal transduction system, domain protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVN3_9GAMM
ABC-type amino acid transport/signal transduction system, domain protein {ECO:0000313|EMBL:EDY86249.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
amino acid ABC transporter periplasmic protein
SCNpilot_expt_500_p_scaffold_151_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36124..37395)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364533F rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99692.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_151_28
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37385..38224)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E4660 rbh
Magnesium transporter {ECO:0000313|EMBL:GAN45929.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative Mg2+ and Co2+ transporter CorC
SCNpilot_expt_500_p_scaffold_151_29
unknown

Not on your lists

comp(38275..38541)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_151_30
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(38641..40005)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9E5_CALAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAM01883.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Displaying items 1-30 of 77 in total

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