name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_39_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
70..2322
|
Putative transmembrane sensor domain protein n=1 Tax=Variovorax sp. CF313 RepID=J2TM91_9BURK
rbh
Putative transmembrane sensor domain protein {ECO:0000313|EMBL:EJL79702.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_p_scaffold_39_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2319..3155
|
Beta-lactamase domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYT6_VARPE
rbh
beta-lactamase domain-containing protein
rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:ADU40061.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_39_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5346..5831
|
Type IV fimbrial biogenesis protein FimT n=3 Tax=Bacteria RepID=S2WX81_DELAC
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35802.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Tfp pilus assembly protein FimT-like protein; K08084 type IV fimbrial biogenesis protein FimT
|
|
SCNpilot_expt_500_p_scaffold_39_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5924..6394
|
Type IV pilus modification protein PilV n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XSR3_DELAC
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35987.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
type IV pilus modification protein PilV; K02671 type IV pilus assembly protein PilV
|
|
SCNpilot_expt_500_p_scaffold_39_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6399..7256
|
pilus assembly protein PilW n=1 Tax=Chryseobacterium taeanense RepID=UPI00036314D1
rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35988.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Tfp pilus assembly protein PilW-like protein; K02672 type IV pilus assembly protein PilW
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7253..7822
|
Type 4 fimbrial biogenesis protein PilX n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AU96_DELSC
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35803.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
type 4 fimbrial biogenesis protein PilX; K02673 type IV pilus assembly protein PilX
|
|
SCNpilot_expt_500_p_scaffold_39_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7838..12835
|
Type IV pilus assembly protein PilY1 n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X3W1_DELAC
rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35989.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
fimbrial assembly protein; K02674 type IV pilus assembly protein PilY1
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12874..13290
|
Tfp pilus assembly protein PilE-like protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZC4_DELAS
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35990.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Tfp pilus assembly protein PilE-like protein; K02655 type IV pilus assembly protein PilE
|
|
SCNpilot_expt_500_p_scaffold_39_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13309..13794)
|
molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Variovorax paradoxus RepID=UPI00036EE38C
molybdenum cofactor biosynthesis protein c; K03637 molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_39_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13848..15413
|
peptidase M48 n=1 Tax=Variovorax paradoxus RepID=UPI000365FDB4
rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35806.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
peptidase m48 ste24p
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15433..15786)
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000369AEE9
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35807.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein; K08972 putative membrane protein
|
|
SCNpilot_expt_500_p_scaffold_39_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15881..16345)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWL0_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL79721.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_39_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16433..17179)
|
Integral membrane protein TerC n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYS1_VARPE
rbh
integral membrane protein terc
rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35809.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_expt_500_p_scaffold_39_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17608..18153
|
Putative Fe-S protein n=1 Tax=Variovorax sp. CF313 RepID=J2L3B6_9BURK
rbh
Putative Fe-S protein {ECO:0000313|EMBL:EJL79723.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein; K06938
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18156..18461
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035CE7B7
Uncharacterized protein {ECO:0000313|EMBL:EJL79724.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_39_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18477..19037)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHP7_9BURK
rbh
yaeq family protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL79725.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_p_scaffold_39_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19079..21250)
|
TonB-dependent siderophore receptor n=1 Tax=Variovorax sp. CF313 RepID=J3CWL3_9BURK
rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJL79726.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
TonB-dependent siderophore receptor
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21267..22379)
|
Putative iron-regulated membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2TMB3_9BURK
rbh
Putative iron-regulated membrane protein {ECO:0000313|EMBL:EJL79727.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
PepSY-associated TM helix-containing protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22512..23891)
|
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Adenylosuccinate lyase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYR5_VARPE
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24023..24634
|
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
rbh
Glutathione S-transferase domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CR92_VARPS
rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35816.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_expt_500_p_scaffold_39_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24752..25546)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYR3_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35817.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
short-chain dehydrogenase/reductase sdr
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25543..26841)
|
Major facilitator superfamily transporter n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYR2_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35818.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
major facilitator superfamily transporter
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26860..28077)
|
cyclopropane-fatty-acyL-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ADU40036.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ADU40036.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYR1_VARPE
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28074..28871)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYR0_VARPE
rbh
hypothetical protein; K09701 hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU40035.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_39_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28868..30202)
|
Amine oxidase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYQ9_VARPE
rbh
amine oxidase
rbh
Amine oxidase {ECO:0000313|EMBL:ADU40034.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_39_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30496..31110)
|
Glutathione peroxidase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYQ8_VARPE
rbh
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_39_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31189..32097
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWL6_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL79731.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32184..33074
|
RNA polymerase subunit sigma-24 n=1 Tax=Variovorax paradoxus RepID=UPI00035C2EDF
rbh
RNA polymerase sigma-70 factor, TIGR02957 family {ECO:0000313|EMBL:EJL79732.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
rbh
|
|
SCNpilot_expt_500_p_scaffold_39_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33162..33623
|
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
alkylhydroperoxidase n=1 Tax=Variovorax paradoxus RepID=UPI00037B4C3D
alkylhydroperoxidase like protein
|
|
SCNpilot_expt_500_p_scaffold_39_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33627..34811)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003800AF1
rbh
Rare lipoprotein A {ECO:0000313|EMBL:EJL79734.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rare lipoprotein a; K03642 rare lipoprotein A
rbh
|