name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_147_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..1534)
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CCP6_9BURK
rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL68964.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
diguanylate cyclase/phosphodiesterase
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1719..3401
|
S-layer protein n=1 Tax=Variovorax paradoxus RepID=UPI000361882D
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL68965.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3683..3895
|
Filamentous hemagglutinin family outer membrane protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3Y7_VARPE
filamentous hemagglutinin family outer membrane protein; K15125 filamentous hemagglutinin
Filamentous hemagglutinin family outer membrane protein {ECO:0000313|EMBL:ADU38106.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_147_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5579..6922
|
Na+/H+ dicarboxylate symporter n=1 Tax=Variovorax sp. CF313 RepID=J2JIL4_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34734.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
sodium:dicarboxylate symporter; K11103 aerobic C4-dicarboxylate transport protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6928..7632
|
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVD7_VARPE
rbh
GntR family transcriptional regulator
rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADU38731.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_147_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7706..8824
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVD8_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34732.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8962..9399
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CAP2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67734.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_147_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9410..10909
|
Putative carotenoid oxygenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XF34_VARPD
rbh
putative carotenoid oxygenase
rbh
Putative carotenoid oxygenase {ECO:0000313|EMBL:AGU51168.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_p_scaffold_147_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10941..11843)
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UW78_VARPE
rbh
LysR family transcriptional regulator
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38735.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_147_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11957..13750
|
gcl; glyoxylate carboligase Gcl (EC:4.1.1.47)
rbh
Glyoxylate carboligase Gcl {ECO:0000313|EMBL:AGU51170.1}; EC=4.1.1.47 {ECO:0000313|EMBL:AGU51170.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Glyoxylate carboligase Gcl n=1 Tax=Variovorax paradoxus B4 RepID=T1XGC8_VARPD
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13764..14549
|
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Hydroxypyruvate isomerase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVR6_VARPS
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14573..15481
|
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
rbh
2-hydroxy-3-oxopropionate reductase n=1 Tax=Variovorax sp. CF313 RepID=J3CAN8_9BURK
rbh
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EJL67729.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_p_scaffold_147_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15545..16882)
|
FAD dependent oxidoreductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UW82_VARPE
rbh
fad dependent oxidoreductase
rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADU38739.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_147_14
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17552..17719)
|
Uncharacterized protein {ECO:0000313|EMBL:EWS64177.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
|
|
SCNpilot_expt_500_p_scaffold_147_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18046..19302
|
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34724.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIQ34724.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
malic protein NAD-binding protein; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Malic protein NAD-binding protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UW83_VARPE
|
|
SCNpilot_expt_500_p_scaffold_147_16
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19371..20162)
|
hyuE; hydantoin racemase (EC:5.1.99.-)
hypothetical protein n=1 Tax=Pseudomonas veronii RepID=UPI00034C557C
Hydantoin racemase {ECO:0000313|EMBL:ETK14301.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
|
|
SCNpilot_expt_500_p_scaffold_147_17
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(20191..21252)
|
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00037120C9
rbh
OsrF; K09703 hypothetical protein
rbh
OsrF {ECO:0000313|EMBL:AET59909.1}; TaxID=985665 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae (strain HPL-003).;"
|
|
SCNpilot_expt_500_p_scaffold_147_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21304..22935)
|
hypothetical protein n=1 Tax=Streptomyces RepID=UPI000364F905
rbh
Putative membrane protein {ECO:0000313|EMBL:EIM30770.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
peptide ABC transporter
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_19
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22990..23865
|
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00035FAD4F
rbh
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EGP42465.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
IclR family transcriptional regulator
|
|
SCNpilot_expt_500_p_scaffold_147_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24008..25042
|
taurine ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003750ABF
rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EJL68783.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
nmt1/thi5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_21
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25042..25809
|
Uncharacterized ABC transporter ATP-binding protein MJ0412 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YHD8_9BURK
rbh
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
rbh
Uncharacterized ABC transporter ATP-binding protein MJ0412 {ECO:0000313|EMBL:CBA34007.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
|
|
SCNpilot_expt_500_p_scaffold_147_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25823..26593
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J3CHK0_9BURK
rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJL71774.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26644..26865)
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVS4_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20577.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_p_scaffold_147_24
bacterium YEK0313, Bacteria
|
Not on your lists |
26993..28141
|
UPI0003D5AE0E related cluster n=1 Tax=unknown RepID=UPI0003D5AE0E
O-acetyltransferase OatA {ECO:0000313|EMBL:CEJ15184.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Probable lipopolysaccharide modification acyltransferase
|
|
SCNpilot_expt_500_p_scaffold_147_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28077..29429)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037100F9
rbh
integral membrane sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29426..30115)
|
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036D0566
rbh
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34717.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
winged helix family two component transcriptional regulator
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30228..30917
|
PA-phosphatase n=1 Tax=Variovorax paradoxus RepID=UPI00036AF5C3
rbh
phosphoesterase pa-phosphatase-like protein
rbh
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ADU38754.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_147_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30928..31824)
|
Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UW98_VARPE
rbh
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:ADU38755.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_500_p_scaffold_147_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31924..33351)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI0003690093
rbh
histidine kinase
rbh
|
|
SCNpilot_expt_500_p_scaffold_147_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33348..34031)
|
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037A9028
rbh
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34713.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
winged helix family two component transcriptional regulator
rbh
|