name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_p_scaffold_700_1
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..9519)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003811C8F
Uncharacterized protein {ECO:0000313|EMBL:KJK03110.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
outer membrane protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_700_2
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9698..10690)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036688FC
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACA95898.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
|
|
SCNpilot_expt_500_p_scaffold_700_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11071..13002)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000374241D
rbh
ATPase domain-containing protein
|
|
SCNpilot_expt_500_p_scaffold_700_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13062..13793
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037804E0
rbh
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AGU51780.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_expt_500_p_scaffold_700_5
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13850..14809)
|
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J3GTY0_9PSED
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJM74952.1}; Flags: Precursor;; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_p_scaffold_700_6
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14836..15885)
|
Ornithine cyclodeaminase {ECO:0000313|EMBL:AGH86396.1}; EC=4.3.1.12 {ECO:0000313|EMBL:AGH86396.1};; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
Ornithine cyclodeaminase n=3 Tax=Ralstonia solanacearum RepID=M4ULD9_RALSL
rbh
|
|
SCNpilot_expt_500_p_scaffold_700_7
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16026..16448
|
AsnC family transcriptional regulator n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036EF69C
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAE48684.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
AsnC family transcriptional regulator
|
|
SCNpilot_expt_500_p_scaffold_700_8
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16618..17382
|
Glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein n=2 Tax=Ralstonia solanacearum RepID=F6G8C8_RALS8
rbh
substrate-binding periplasmic (Pbp) abc transporter protein
rbh
Putative substrate-binding periplasmic (Pbp) abc transporter protein {ECO:0000313|EMBL:CBJ53292.1}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
|
|
SCNpilot_expt_500_p_scaffold_700_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17408..18196
|
Putative amino acid transmembrane ABC transporter protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NGT3_RALSL
rbh
putative amino acid transmembrane ABC transporter protein
rbh
Putative amino acid transmembrane ABC transporter protein {ECO:0000313|EMBL:CBJ40107.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
|
|
SCNpilot_expt_500_p_scaffold_700_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18193..18936
|
amino-acid transporter subunit ; ATP-binding component of ABC superfamily (EC:3.6.3.28); K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
rbh
Amino-acid transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CBJ53290.1}; EC=3.6.3.28 {ECO:0000313|EMBL:CBJ53290.1};; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
sulfate ABC transporter ATP-binding protein n=1 Tax=Ralstonia solanacearum RepID=UPI0003089B45
rbh
|
|
SCNpilot_expt_500_p_scaffold_700_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19129..20622
|
Cytosine/uracil/thiamine/allantoin permease n=1 Tax=Variovorax sp. CF313 RepID=J2STQ8_9BURK
rbh
Cytosine/uracil/thiamine/allantoin permease {ECO:0000313|EMBL:EJL68972.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
cytosine/purines uracil thiamine allantoin permease; K03457 nucleobase:cation symporter-1, NCS1 family
rbh
|
|
SCNpilot_expt_500_p_scaffold_700_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20654..21391
|
Asp/Glu racemase n=1 Tax=Variovorax paradoxus RepID=UPI00037A9321
rbh
Hydantoin racemase {ECO:0000313|EMBL:EJL68973.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_p_scaffold_700_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21406..22170
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CCQ0_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL68974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transcriptional regulator, GntR family
rbh
|
|
SCNpilot_expt_500_p_scaffold_700_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22180..22740
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036EC157
rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KEC74480.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
hypothetical protein
|
|
SCNpilot_expt_500_p_scaffold_700_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22867..24639
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000380E137
rbh
diguanylate cyclase/phosphodiesterase
Tax=GWA2_Burkholderiales_64_37_curated
|
|
SCNpilot_expt_500_p_scaffold_700_16
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24706..25689
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000363FC1B
rbh
NAD-dependent epimerase/dehydratase family protein
rbh
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AGS23291.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
|
|
SCNpilot_expt_500_p_scaffold_700_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25841..27331
|
Xanthine permease n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVQ2_VARPS
rbh
xanthine permease; K03458 nucleobase:cation symporter-2, NCS2 family
rbh
Xanthine permease {ECO:0000313|EMBL:ACS20555.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_expt_500_p_scaffold_700_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27342..28166)
|
Aldo/keto reductase, diketogulonate reductase n=1 Tax=Variovorax sp. CF313 RepID=J3CCQ2_9BURK
rbh
Aldo/keto reductase, diketogulonate reductase {ECO:0000313|EMBL:EJL68979.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
aldo/keto reductase
rbh
|
|
SCNpilot_expt_500_p_scaffold_700_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28231..29700)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00037370EB
rbh
integral membrane sensor signal transduction histidine kinase
|
|
SCNpilot_expt_500_p_scaffold_700_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30051..31133
|
tartrate dehydrogenase (EC:4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
rbh
tartrate dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036AD9E2
rbh
Tartrate dehydrogenase {ECO:0000313|EMBL:EJL68980.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_expt_500_p_scaffold_700_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31173..31700
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V324_VARPE
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU39163.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|