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SCNpilot_expt_500_p_scaffold_61_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1253..1942

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein, putative n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8Y1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 229.0
  • Bit_score: 364
  • Evalue 7.70e-98
  • rbh
lipoprotein, putative similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 229.0
  • Bit_score: 364
  • Evalue 2.40e-98
  • rbh
Lipoprotein, putative {ECO:0000313|EMBL:ADU37304.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 229.0
  • Bit_score: 364
  • Evalue 1.10e-97

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAAGAAGACTCTCATCGCGATCGCAGTGATTCTGGTTGGAAGCGTCGCTTCGGCCACCAGCACGACGGCTCTTGCCGCCACCAGCACCTCGACCGGCTCTTCCAGTGCCGCGGGATCGGTGGCAGCAAGCTCCGGCACCGGCAGCGCATTGAGCTACAACGCGGCCAATTCCAGCTCGTCGGCCAGCGCCAACGCAGCAGGCGGCGCGGTCAGCTTCCCTGGCATTCGCCTTGGCGGCGCGACGGCAGGCGGCACGGCAACCACGCAAGGCTCGGTGACCAGCGTGGCCGCAACGACGGGCAACGGCCTCGCAGTGGGCGGTGCCAACGCTTCGGCCAATTCCAGCGCTGCCTCCAACGCCAATTACAGCGCCGGCGGCTCGAACCCTATCAGCGGCAGTGCGGGCGGTAGCGCCAGCTCCACCACCAACAACACGGCCGCTACGGCTGCCGGCCCTGGCGGCGGCCTGGCCGTGGTGACCCGCACTTCGGGCACGACCTCGGGCTACAGCGCTTCGTCGGGTGCCGTCAACGGCTTCATCAACGGCACCACCACGTCGGCAACGGCGGGCTCGACCGGCGGCTCCATGGGCGTGACGAACTTCCACTTCGGCAATGCCGGCGGCTTCACCAACGGTGGCGGCACCGGCGGCGTGGCCAGCGCCGGCGCAACCGCATCGGCACCCTGA
PROTEIN sequence
Length: 230
MKKTLIAIAVILVGSVASATSTTALAATSTSTGSSSAAGSVAASSGTGSALSYNAANSSSSASANAAGGAVSFPGIRLGGATAGGTATTQGSVTSVAATTGNGLAVGGANASANSSAASNANYSAGGSNPISGSAGGSASSTTNNTAATAAGPGGGLAVVTRTSGTTSGYSASSGAVNGFINGTTTSATAGSTGGSMGVTNFHFGNAGGFTNGGGTGGVASAGATASAP*