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SCNpilot_expt_500_p_scaffold_61_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6817..7293)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KJI5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 157.0
  • Bit_score: 283
  • Evalue 1.60e-73
Uncharacterized protein {ECO:0000313|EMBL:EJL80355.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 157.0
  • Bit_score: 283
  • Evalue 2.20e-73
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 157.0
  • Bit_score: 280
  • Evalue 2.40e-73

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGCAAAAGATCGTTCCCTGCCTATGGTTCGACCGCAACGGCGAAGACGCGCTGAAGTTCTACACGGCCATTTTTCCGAACTCGCGCGTGACCGACAAACTGCTCTGGGGCGACACCAACCCAGAGCTGAAAGGATCGCTGCTCACCGCGACCTTCGAACTCGAAGGTCAGGAGTTCATGTTGATCAACGGCGGCCCGCAGTACAAGTTCACGCCGGCCATTTCGATGTACCTGAAGTGCAAGACGCAGGCCGAGGTCGACAACTACTGGAACAAGCTGCTCGAAGGCGGCGGCGAGCCGGTGCAGTGCGGCTGGATCACCGACCGCTACGGCGTGTCGTGGCAGATCGTGCCCGACGGCCTGATCCAGATGTTCCAGGACAAGGACCCGGCCAAGGCCGCGCGTGCGATGCAGGCGATGATGAAGATGGTCAAGCTCGACATCGCCGAAGTGCGCAAGGCCTACGACGGGGCGTGA
PROTEIN sequence
Length: 159
VQKIVPCLWFDRNGEDALKFYTAIFPNSRVTDKLLWGDTNPELKGSLLTATFELEGQEFMLINGGPQYKFTPAISMYLKCKTQAEVDNYWNKLLEGGGEPVQCGWITDRYGVSWQIVPDGLIQMFQDKDPAKAARAMQAMMKMVKLDIAEVRKAYDGA*