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SCNpilot_expt_500_p_scaffold_61_23

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(21691..23337)

Top 3 Functional Annotations

Value Algorithm Source
Qaraquat-inducible protein B n=1 Tax=Variovorax sp. CF313 RepID=J2KJH9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 548.0
  • Bit_score: 1002
  • Evalue 1.30e-289
  • rbh
Qaraquat-inducible protein B {ECO:0000313|EMBL:EJL80350.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 548.0
  • Bit_score: 1002
  • Evalue 1.90e-289
mammalian cell entry related domain-containing protein; K06192 paraquat-inducible protein B similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 556.0
  • Bit_score: 968
  • Evalue 8.70e-280
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1647
ATGAGTGAACCAGAGCAACCGCAAGACAAACCGGCGCCGTCACCGGCGCTTCCCAGGCCGCGCGTGGTGCGGCGGCGCGAGTGGCTGCCGTCGCTGATCTGGCTGATTCCGATCGTCGCGGCGCTGGTCGGCATCACGCTGGTGGCGCGCATCCTGATGGAGCGCGGCCCCGAAGTGGTGCTGACCTTCAAGACCGCCGAGGGCCTGGAGGCCGGCAAGACCGCCGTCAAGTACAAGGACGTGCAGATCGGCCTCGTCACGCACCTGCGGCTGGCGCGCGACCGCTCGCACGTACGGGTGCTGGTGCAGTTCAACAAGGACGCCGAGAGCTTCACCGCTTCGGACTCGCGCTTCTGGGTGGTGCGCCCGCGCCTGGACACCTCGGGCATCTCGGGGCTGAACACCTTGCTGTCGGGCGCGTACATCGGCGCCGACGCGGGCGTGTCGAAAGAAACCTCGGGTGAATTCACCGGGCTCGAAACGCCGCCCATCGTCACGCGCGACGACTCGGGCCAGCAGTTTCTTCTGCGCGCCAACGACGTGGGCTCGCTCGACGTGGGCTCGCCCGTGTACTTCCGGCGCGTCAAGGTCGGGCAGGTGGCGGCCTACGAGCTCGACGGCGACGGGCGCGGCGTGACGATCCGCGTGTTCGTCAATGCGCCGTACGACAAGTTCGTCGGCATGAACACGCGCTTCTGGCAGGCCAGCGGCATCGACGCGCAGCTCAGCGCCAGCGGCTTCACGCTGCGCACGCAGTCGCTCGCGACCATCCTGCTGGGCGGCATCGCCTTCCAGGCGCCCGAGGACGCGATGGGCCCGCTGGCCAAGGCCAACGCCTCGTTCACGCTGGCGCAGGACGAGGCCACGGCCATGAAGGAGCCCGACGGCCCCTCGCAGACGCTGCTGATGTACTTCAATCAGTCGCTGCGCGGCCTGACGCCGGGCGCGCCGGTCGACTTCCGCGGCGTGGTGATCGGCGAGGTCAAGTCGATCGGCGTCGAATTCGACCGCGCCGAGCGCGAGTTCCGCATGCCGGTGCTGGTGCAGGTCTACCCCGACCGTCTGCGCCGCCGCAGCGGCAGTGCCGAGGCCACAGAGTCGCGCTCCACCCAGCAGGAGCGCTTGCGCTTCCTGGCGGAAAAGGGGCTGCGCGCCCAGTTGCGCAACGGCAATCTGCTGACCGGCCAGGTCTACGTGGCGCTCGACTTCTTCCCGAAGGCGCCCGCGGCCAAGATCGATGTGACGAAGAACCCGATCGAGCTGCCCACGGTGGCCAACAGCCTCGACGAGATCCAGTCGCAGGTGCAGGAAATCGCGACCAAGCTCAACAAGGTGCCCTACGAGCAGATCGCGGGCGACCTGCGCACCACGCTCGCCACGCTCAACAAGACGCTCACCGCCACGGAGCAGACCGTGAACCGCATCAACAGCGACGTCACGCCCGAGCTGGCGGCGGCCATGAAGGACGTGCGCAAGACCGTCAACACGGCCGAGCGCACGCTGGCCGACGACTCGCCGCTGCAGCAGGACATGCGCCAGACGCTGCGCGAACTGACGCGCGCGGCCGGCTCGGTGCGCGTGCTGACCGACTACCTCGAGCGCCACCCAGAATCGCTGCTGCGCGGCAAACCGGACGACAAGAAATGA
PROTEIN sequence
Length: 549
MSEPEQPQDKPAPSPALPRPRVVRRREWLPSLIWLIPIVAALVGITLVARILMERGPEVVLTFKTAEGLEAGKTAVKYKDVQIGLVTHLRLARDRSHVRVLVQFNKDAESFTASDSRFWVVRPRLDTSGISGLNTLLSGAYIGADAGVSKETSGEFTGLETPPIVTRDDSGQQFLLRANDVGSLDVGSPVYFRRVKVGQVAAYELDGDGRGVTIRVFVNAPYDKFVGMNTRFWQASGIDAQLSASGFTLRTQSLATILLGGIAFQAPEDAMGPLAKANASFTLAQDEATAMKEPDGPSQTLLMYFNQSLRGLTPGAPVDFRGVVIGEVKSIGVEFDRAEREFRMPVLVQVYPDRLRRRSGSAEATESRSTQQERLRFLAEKGLRAQLRNGNLLTGQVYVALDFFPKAPAAKIDVTKNPIELPTVANSLDEIQSQVQEIATKLNKVPYEQIAGDLRTTLATLNKTLTATEQTVNRINSDVTPELAAAMKDVRKTVNTAERTLADDSPLQQDMRQTLRELTRAAGSVRVLTDYLERHPESLLRGKPDDKK*