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SCNpilot_expt_500_p_scaffold_117_20

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(19562..20263)

Top 3 Functional Annotations

Value Algorithm Source
urea ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D9F3E similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 233.0
  • Bit_score: 445
  • Evalue 2.70e-122
  • rbh
Urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:EJL73160.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 233.0
  • Bit_score: 445
  • Evalue 4.90e-122
urea ABC transporter ATP-binding protein UrtE; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 233.0
  • Bit_score: 442
  • Evalue 9.30e-122
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGAGCAACATCAACCTCAAGGTCGAGGACCTTCACGTCGCCTATGGGCAGAGCGAGGCCCTGCACGGTATCTCGTTCGATGGCCATGCCAACGAGACCGTGGCCATCATGGGCCGCAACGGCATGGGCAAGACCACGCTGTTCAAGAGCCTGATGGGCGTGCTGCCGCTCAAGAGCGGTCGCATCGAGGTGGCGGGGCAGGACGTGTCGCGCGACGAGAGCTTCCGCCGCGTGGCCAAGGGCATCGCCTACGTGCCGCAGGGCCGGATGATCTTCCCGACGCTGACGGTGGAGGAGAACATCCAGACCGGCCTCGAGAACTCCAGGACCCGCCGCATCCCGGAGGAAATCTACGCGCTCTTCCCCGTGCTGTGGGACATGAAGAGCCGCAAGGGCGGCAACCTCTCCGGTGGCCAGCAACAGCAGCTCGCCATCGCGCGCGCCCTTGTCACCGACCCCAAGGTGCTGCTGCTCGACGAGCCCACCGAAGGCATCCAGCCTTCGATCATCAAGGACATCGCCAAGGCGCTCAACGAGATCCGCAAGCTGCGCGGCATCACCATCGTCGTGTCCGAGCAAGTGCTCAGCTTCGCGATGGACGTGGCCGACCGGCTCTTCGTCATCGAAGGCGGACGCCTCGTGCACGAGACCTCGCGCGACAAGACCGACGTGGATCACATCAAAGCCTACCTCTCTGTTTAA
PROTEIN sequence
Length: 234
MSNINLKVEDLHVAYGQSEALHGISFDGHANETVAIMGRNGMGKTTLFKSLMGVLPLKSGRIEVAGQDVSRDESFRRVAKGIAYVPQGRMIFPTLTVEENIQTGLENSRTRRIPEEIYALFPVLWDMKSRKGGNLSGGQQQQLAIARALVTDPKVLLLDEPTEGIQPSIIKDIAKALNEIRKLRGITIVVSEQVLSFAMDVADRLFVIEGGRLVHETSRDKTDVDHIKAYLSV*