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SCNpilot_expt_500_p_scaffold_117_23

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(22249..23163)

Top 3 Functional Annotations

Value Algorithm Source
urea ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003685675 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 304.0
  • Bit_score: 591
  • Evalue 6.70e-166
  • rbh
urtB1; urea ABC transporter, permease protein UrtB similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 304.0
  • Bit_score: 579
  • Evalue 4.90e-163
  • rbh
Urea ABC transporter, permease protein UrtB {ECO:0000313|EMBL:AGU50318.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 304.0
  • Bit_score: 579
  • Evalue 2.20e-162

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGACTCTGTCGGACATGATGAACATCGGCCTCATGCAGGGCTTCGCGGGGCTGAGCCTCTTCGCGGTGCTGCTGCTGATGGGGCTGGGCCTGGCGATCATCTTCGGCCAGATGGGCGTGATCAACATGGCGCATGGCGAATTCATGACCATCGGCGCCTATTCGATCTACCTGGCCGCGCGCGTCACCGAAAGCCTGGCGCCCGAGTTCATGCCGTACTACTTTCCGATCGCCATCGCGCTGGCTTTCGTCTTCGCCTTCATCGTGGGCTGGATCGTGGAGTGGGCGCTGATACGCCACCTCTACAAGCGCCCGCTCGACACGCTGCTCGCCACCTGGGGCGTGAGCCTGGGGTTGCAGCAGATCTTCCGCACCTTCATCGGCCCGAAGGAAGTGAGCCCCACGCTGCCCGAATGGCTCATGGGCTCGTGGACGCCGCACGAGGGGCTGGACATTCCCATCAACGGCCTGTTCGTGCTGGTGCTCACGGCACTCGTCACCGGCGGCGTGCTGGTCGCGCTGCACAAGAGCCGCTGGGGCCTCAGGGTGCGCGCCACCGTGGCCAACCGAACGATGGCCAACGCCACCGGCATCGACACCAGGAAGACCGACCGCCTGACCTTCGCCATCGGCTGCGGCATCGCGGGCGTGGCGGGCGCGGCCTTCACCACCATCGGCTCGACCGGACCGACCTCGGGGTCGCTCTACATCGTCGACGCCTTCCTGGTCGTCACCTTCGGCGGCGCGGCCAGTCTCTTCGGCACCGTGGTCTCGGCCTTCGGCATCGCGCAGACGCAGTCGGTGTCCGAGTTCTTCATGACCGGCTCGATGGCCAAGGTGCTGACGCTGTCGCTGATCGTCTTCATCCTGATGCTGCGACCGCAAGGCCTGTTCGCCGTCAAGGTCCGCCGCTGA
PROTEIN sequence
Length: 305
MTLSDMMNIGLMQGFAGLSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAARVTESLAPEFMPYYFPIAIALAFVFAFIVGWIVEWALIRHLYKRPLDTLLATWGVSLGLQQIFRTFIGPKEVSPTLPEWLMGSWTPHEGLDIPINGLFVLVLTALVTGGVLVALHKSRWGLRVRATVANRTMANATGIDTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLFGTVVSAFGIAQTQSVSEFFMTGSMAKVLTLSLIVFILMLRPQGLFAVKVRR*