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SCNpilot_expt_500_p_scaffold_401_26

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27228..29237

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer coupling protein TraG n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2ELN6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 676.0
  • Bit_score: 1252
  • Evalue 0.0
Conjugal transfer protein TraG {ECO:0000313|EMBL:AIJ47713.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 670.0
  • Bit_score: 1252
  • Evalue 0.0
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 673.0
  • Bit_score: 1244
  • Evalue 0.0

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2010
ATGCAAGGGACGAACGTGCTGTTCGGCCAGATCGCTGTCGTGCTCGGCATCGTGATCGCCGGCGTCTGGGGCGCCACACAATGGACGGCTGGCGCCCTGGGCTACCAGCTACGCCTGGGCTCGCCGTGGTTCGATTTCGCCGGCACGCCGGTCTATCACCCGTGGCGGCTGTTCGAGTGGTGGTTCTTCTTCGACGCCTACGCGCCGCGCGTCTTCGACATCGGTGGCGCGATCGCGGGTGGCAGCGGCCTGGTGGCCGTGCTGGTGGCCATCGGCATGTCGATTTGGCGCTCGCGCCAATCGAAGCTGGTCACGACCTACGGCACGGCGCGCTGGGCCACCGCCGATGACATTCGCAAGGCCGGCCTCGCGCTGTCGGCCGGTGTATTCCTCGGCCAGCACGATCGCCAGTACCTGCGCCATGAAGGTCCGGAACACGTCCTGACCTTCGCGCCCACGCGCTCGGGCAAAGGCGTGGGCCTGGTGGTACCCACGCTGCTGTCCTGGCCGGCCTCGGCTGTGATCCACGACATCAAGGGCGAGAACTGGAGCATCACGGCCGGCTGGCGCTCGCGCTTCTCGCACTGCCTGCTGTTCAACCCCACCGATGCGAAGTCGGCTGCGTACAACCCCTTGCTGGAAGTCCGGCGCGGCGCGCATGAGGTGCGCGACGTGCAGAACATCGCGGACATCCTGGTCGATCCCGAAGGCGCGCTGGAGCGGCGCAACCACTGGGAGAAGACCAGCCACGCGCTGCTGGTCGGCGCCATCCTGCATGTGCTGTATGCCGGCGAGGACAAGACGCTGCGGGGCGTGGCGAACTTCCTTTCCGATCCGGCGTGCCCGTTCGAGTTGACCCTGCACCGGATGATGACCACGCCGCACCTGGTGAGCGAGGAGGGCGGTGGCCCCCATCCGGTGGTGGCATCCGCCGCGCGCGAAGTGCTCAACAAGAGCGAGAACGAACGCTCGGGCGTGCTGTCCACGGCCATGTCGTTCCTCGGGCTGTACCGCGACCCCACGGTGGCCGAGGTCACCTCGCGCTGCGACTGGCGCATCGCCGATCTGATCTCGGCACAGGTTCCGGTGTCGCTGTACTTGGTCGTGCCGCCCTCGGACATCAGCCGCACCAAGCCGCTGATCCGGCTGATCCTCAACCAGGTCGGCCGCCGCCTCACCGAATCGCTCGACGGCTCCGACGGCATCGCCCGCCGCCACAAGCTGCTGCTGATGCTCGACGAATTCCCGGCCCTGGGCCGCCTGGACTTCTTCGAGACGGCCCTGGCCTTCATGGCGGGCTACGGCATCCGAAGCTTCCTGATCGCGCAGTCGCTCAACCAGATCGACAAGGCCTACGGCCAGAACCATTCGATCCTCGACAACTGCCATGTGCGCGTGACGTTCGCCACGAACGACGAGCGCACGGCAAAGCGCATCTCCGAGACGCTGGGCACGGCCACCGAGCTGCGTGCGCAGCGCAACTACGCCGGCCACCGGCTCGCACCTTGGCTGGGACATCTGATGGTGTCGCGCCAGGAGACGGCGCGTCCGCTGCTGACACCCGGCGAGGTGATGCAACTCCCGCCTGACGAGGCGGTGGTGATGGTCTCCAGCGTAGCGCCGATCAAGGCCAAGAAGCTGCGCTATTACGCGGACAGCAATTTCAAGCGGCGAGTGCTGCCACCGCCTGTGCTGGCGGATGGACGCTACGCCGACGTGCCACCGGTGCGCTCCGACGACTGGAGCGGCCTGGCGATTCCTTCTGTTCCGCCGGCACCGGCCATCGAAGCCATAGATGGCCTGGGCAGTGCCGACGACGGCGGCCCACGCCGCCAGCCCGAACTCTCCGAAACCGTCGCCTACGACCCCGATCTGACCGCACCCGCGGCCGACCTCGGGCTGCTCGATGACGACGACTTGCCGCTTCCTCTCCCGCGCCAGCTCGACCCGGCCCTGCAGCGCACGGCCCGGCTGGCATCCCTCGACCCTGACGACGGAATCCAACTATGA
PROTEIN sequence
Length: 670
MQGTNVLFGQIAVVLGIVIAGVWGATQWTAGALGYQLRLGSPWFDFAGTPVYHPWRLFEWWFFFDAYAPRVFDIGGAIAGGSGLVAVLVAIGMSIWRSRQSKLVTTYGTARWATADDIRKAGLALSAGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWSITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALERRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLVSEEGGGPHPVVASAAREVLNKSENERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLISAQVPVSLYLVVPPSDISRTKPLIRLILNQVGRRLTESLDGSDGIARRHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSSVAPIKAKKLRYYADSNFKRRVLPPPVLADGRYADVPPVRSDDWSGLAIPSVPPAPAIEAIDGLGSADDGGPRRQPELSETVAYDPDLTAPAADLGLLDDDDLPLPLPRQLDPALQRTARLASLDPDDGIQL*