ggKbase home page

SCNpilot_expt_500_p_scaffold_3531_3

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2097..4214

Top 3 Functional Annotations

Value Algorithm Source
ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037EAFB5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 705.0
  • Bit_score: 1191
  • Evalue 0.0
  • rbh
type I secretion system ATPase; K12541 ATP-binding cassette, subfamily C, bacterial LapB similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 704.0
  • Bit_score: 1133
  • Evalue 0.0
Type I secretion system ATPase {ECO:0000313|EMBL:ADU39198.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 704.0
  • Bit_score: 1133
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2118
ATGAAGTTGTCTTCGCAGTACACGAGCTGGCTCGACGCCATGCTCTTCGTCGCCCGCCACTACGGCATCGGCGCCTCCGAGGAGAGCGTGCGCGTCTCGCTGGCCTGGGAGCGTGGCGCGCCGCTGGACACGCTGCTCGACCATATGGCGCGGCAGCTCGGCCTGACGGTGCGGCTGGGCGAGTTCTCCGATGCGATGCTCGACCCGTGGCGCCTGCCGCTGGTGGTGGAGTTCGACAACGGCGAGGTCGGCGTCGTGCGCGCCTCCGACGGCCATGGCCAACTGGGCGTGCTGCTCGGCGGCGACCACGGGCTCGAGACGGCGCTGCCGCTCGCCGAACTGCGCCTCCATGCGAAGCGCGTGGCCGTGCTGAGGCCCAACACGGCCGTGCCCGATGCGCGCGTGGACGACTACATCAAGCCCTACAAGGCCAACTGGTTCTGGGCCATCGCGCTGCGCGACTGGCGGCGCTACGGCGACATCGTGCTGGCCTCCATGTTCGCAAACGTGCTGGCGCTCGCGTCGATGATCTTCTCGATGCAGATCTACGACCGCGTGGTGCCGGCGCAGTCCGAGCCCACGCTGTGGGTGCTGTTCGGCGGCGTGATGCTGGCGGTGGTCTTCGAGTTCATGCTGCGCGTGTCTCGCACGCATATCTCCGACGTGATCGGCAAGCGCGCCGACCTCAAGGTGTCGGATGTCGTGTTCGGCCATGCGCTGCGCCTGCGCACCGACGCGCGCTCTAAATCCACGGGCTCCTTCATCGCCCAGGTGCGCGAGGTGGAGCAGGTGCGGGAGCTGCTCACTTCCACCACCATTTCCGCGGTAGCCGACTTGCCGTTCTTCCTGTTGTTCCTGGTCGTGCTCTGGCTGGTGGCCGGACCGCTCGCATTGGTGGCGCTGGCGGCGGTGCCATTGCTGGTCATTCCGGGCCTGCTCATCCAGAAGCCGCTGGCGCGGCTGGCGAGCGAAGGCATGCGCGAATCGGCATTGCGCAATGCCTTGCTGGTCGAAGCCGTCGAAGGCATCGAGGACATCAAGCTCATGCGCGCAGAACCGCGTTTCCAGAACCAGTGGAACCACGTCAACGACGTATCCGCCGGCGTGAGCATGCGGCAGCGCTTTCTCACGAGCCTGCTCATGACATGGACGCAGGAGGTGCAGACCATCGTGTATGCCGTGGTGCTGCTCGCGGGCTGCTTCCTCGTGATGCGGGGCGACATGACGACGGGTGCGCTGGTGGGCTCTTCGATCCTGGCCTCGCGCATGATCTCGCCGCTGGCGCAGTTGTCGGGCGTGTTCGCGCGTTGGCAGCAGGCCAAGGTGGCGCGCGCGGGGCTCGACCAGCTCATGCAGCGCCCGGTCGACCAGGCCGACGGCGCGCGGCTGGTGCATGCCCCCGCGCTGCATGGAAACTACGCGCTGGCGGGTGTCGAGTTTCGCTACGGCAAGGAGGACAAGAGCCCGGCGCTCACGATTGCGCAGCTGCAGATCCAGGCCGGCGACAAGGTCGCATTGCTGGGCCGCATGGGCTCCGGCAAGTCGACGCTGCTGCAACTGCTGGCCGGCCTGCAGTCACCGCAGCAGGGCCATGTGGCGCTCGATGCGCTCGACCTCTCATTGATCGACCCGGCCGACCTGCGCCGCGACATGGGGCTGCTCACGCAGAACGCACGGCTCTTCCACGGCTCCATCCGTGAGAACGTGACCATGGGTATGCCGCTGGCCACCGACGACCAGGTGTTCGAGGCCGTCGCGATGGCGGGCGCCTTGTCTTTTCTTCAATCGCGCGCCGAGGGGCTCGACGAACTGATCCACGAAGGCGGCCTGGGCCTGTCCGGCGGGCAGCGGCAGGCGCTGCTGCTGGCGCGTACGCTGATCCGCCAGCCTTCGATCGTGCTGCTCGACGAGCCGACCGCGCATTTCGACGAAGTCACCGAGCGCCATGTGATCGACTCGATGGGCGCATGGCTGGGGCCGCGCACGCTGGTGGTGGCAACGCATCGCATGCCGGTGTTGCAGTGGGTGGACCGCATCGTCGTGATCGACGGCGGCCGCATCGTGATGGACGGTTCGAAGGACCAGGTTCTTGGAAGGCTCTCCCATGGCAACGCCTGA
PROTEIN sequence
Length: 706
MKLSSQYTSWLDAMLFVARHYGIGASEESVRVSLAWERGAPLDTLLDHMARQLGLTVRLGEFSDAMLDPWRLPLVVEFDNGEVGVVRASDGHGQLGVLLGGDHGLETALPLAELRLHAKRVAVLRPNTAVPDARVDDYIKPYKANWFWAIALRDWRRYGDIVLASMFANVLALASMIFSMQIYDRVVPAQSEPTLWVLFGGVMLAVVFEFMLRVSRTHISDVIGKRADLKVSDVVFGHALRLRTDARSKSTGSFIAQVREVEQVRELLTSTTISAVADLPFFLLFLVVLWLVAGPLALVALAAVPLLVIPGLLIQKPLARLASEGMRESALRNALLVEAVEGIEDIKLMRAEPRFQNQWNHVNDVSAGVSMRQRFLTSLLMTWTQEVQTIVYAVVLLAGCFLVMRGDMTTGALVGSSILASRMISPLAQLSGVFARWQQAKVARAGLDQLMQRPVDQADGARLVHAPALHGNYALAGVEFRYGKEDKSPALTIAQLQIQAGDKVALLGRMGSGKSTLLQLLAGLQSPQQGHVALDALDLSLIDPADLRRDMGLLTQNARLFHGSIRENVTMGMPLATDDQVFEAVAMAGALSFLQSRAEGLDELIHEGGLGLSGGQRQALLLARTLIRQPSIVLLDEPTAHFDEVTERHVIDSMGAWLGPRTLVVATHRMPVLQWVDRIVVIDGGRIVMDGSKDQVLGRLSHGNA*