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SCNpilot_expt_500_p_scaffold_80

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Displaying items 1-30 of 167 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_80_1
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..869)
DNA (867bp) protein (289aa)
Htaa protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BFB3_SANKS
Htaa protein
Htaa protein {ECO:0000313|EMBL:ACZ23416.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_expt_500_p_scaffold_80_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1011..2423
DNA (1413bp) protein (471aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
cysS1; hypothetical protein (EC:6.1.1.16)
Cysteine--tRNA ligase id=7721089 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
SCNpilot_expt_500_p_scaffold_80_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2461..3453
DNA (993bp) protein (331aa)
Putative TrmH family tRNA/rRNA methyltransferase {ECO:0000313|EMBL:KJL38263.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJL38263.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
RNA methyltransferase n=1 Tax=Leifsonia sp. 109 RepID=UPI00036ABECE
tRNA/rRNA methyltransferase protein
SCNpilot_expt_500_p_scaffold_80_4
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3510..3980)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK88_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75749.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_expt_500_p_scaffold_80_5
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3980..5263)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein id=7721110 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Contig_101, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01958.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5339..6448)
DNA (1110bp) protein (370aa)
Glycerol-phosphate porter id=7721111 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
putative sugar ABC transporter ATP-binding protein; K10243 cellobiose transport system ATP-binding protein rbh
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAN02566.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
SCNpilot_expt_500_p_scaffold_80_7
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6696..7622
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B31D6D rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ80812.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_8
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7766..8761
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00037EB126
Uncharacterized protein {ECO:0000313|EMBL:KGJ80815.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein; K09936 hypothetical protein
SCNpilot_expt_500_p_scaffold_80_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8730..9284)
DNA (555bp) protein (185aa)
Putative NAD(P)H nitroreductase YdjA {ECO:0000313|EMBL:KJL31328.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL31328.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Nitroreductase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT48_LEIAQ
nitroreductase
SCNpilot_expt_500_p_scaffold_80_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9287..9721)
DNA (435bp) protein (145aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASJ6_9MICO
oxidoreductase
SCNpilot_expt_500_p_scaffold_80_11
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9817..10815
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003685411
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92234.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_12
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10936..11241
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B4AC1F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS05101.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_expt_500_p_scaffold_80_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11242..11814
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIC6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR24901.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_14
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12003..12203
DNA (201bp) protein (67aa)
cold-shock protein n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B34A1D
Cold-shock protein {ECO:0000313|EMBL:EYT65919.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
cold-shock protein
SCNpilot_expt_500_p_scaffold_80_15
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12236..13318
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B546DA rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ80821.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_16
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13588..14988
DNA (1401bp) protein (467aa)
molecular chaperone GroEL n=1 Tax=Agromyces italicus RepID=UPI0003B5B984
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
groEL; chaperonin GroEL; K04077 chaperonin GroEL
SCNpilot_expt_500_p_scaffold_80_17
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14937..15227)
DNA (291bp) protein (97aa)
hypothetical protein id=7719814 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_18
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15237..16961)
DNA (1725bp) protein (575aa)
phoR; two-component system sensor protein; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] id=7719813 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
putative two-component system sensor kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
SCNpilot_expt_500_p_scaffold_80_19
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17002..17784)
DNA (783bp) protein (261aa)
alkaline phosphatase n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034DE77E rbh
Transcriptional regulator {ECO:0000313|EMBL:EYT65915.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
putative two component system response regulator; K02483 two-component system, OmpR family, response regulator rbh
SCNpilot_expt_500_p_scaffold_80_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17791..19041
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B7B0C3 rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KHK98621.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_expt_500_p_scaffold_80_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19137..20012
DNA (876bp) protein (292aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
folP; dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] rbh
dihydropteroate synthase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037F55B3 rbh
SCNpilot_expt_500_p_scaffold_80_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19976..20734
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034B9D9D
Riboflavin biosynthesis protein RibD protein {ECO:0000313|EMBL:ERK69502.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_23
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20801..21676)
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Humibacter albus RepID=UPI0003B5327F
Contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04094.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
ABC transporter integral membrane subunit
SCNpilot_expt_500_p_scaffold_80_24
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21673..22587)
DNA (915bp) protein (305aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B4207D rbh
Contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04093.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
putative multidrug ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein rbh
SCNpilot_expt_500_p_scaffold_80_25
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22708..24192)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B6CEB4
Uncharacterized protein {ECO:0000313|EMBL:EYT52283.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_80_26
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24252..24956
DNA (705bp) protein (235aa)
Transcriptional regulator, TetR family protein id=7721592 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Transcriptional regulator {ECO:0000313|EMBL:EHR48532.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
putative TetR-family transcriptional regulator
SCNpilot_expt_500_p_scaffold_80_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24993..26630)
DNA (1638bp) protein (546aa)
xpbC; DNA repair helicase; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12] rbh
Helicase protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNJ6_LEIAQ
Helicase protein {ECO:0000313|EMBL:ERK70144.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
SCNpilot_expt_500_p_scaffold_80_28
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26696..28576)
DNA (1881bp) protein (627aa)
hypothetical protein id=7719809 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN02554.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
SCNpilot_expt_500_p_scaffold_80_29
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28687..29262
DNA (576bp) protein (192aa)
cold-shock protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035CB9B0
cold shock protein
Uncharacterized protein {ECO:0000313|EMBL:AGW40862.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_expt_500_p_scaffold_80_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29268..29855
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVV4_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72659.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
Displaying items 1-30 of 167 in total

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