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SCNpilot_expt_500_p_scaffold_1882

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1882_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1..804
DNA (804bp) protein (268aa)
DNA replication and repair protein RecF n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RECF_PARUW
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
recF; DNA replication and repair protein recF; K03629 DNA replication and repair protein RecF
SCNpilot_expt_500_p_scaffold_1882_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(980..2299)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAH1_PARUW
Uncharacterized protein {ECO:0000313|EMBL:CDZ80579.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1882_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2508..2783
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80580.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1882_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2790..3797)
DNA (1008bp) protein (336aa)
Putative Thiamine biosynthesis lipoprotein apbE n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAH3_PARUW
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CDZ80581.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
apbE; thiamine biosynthesis lipoprotein apbE; K03734 thiamine biosynthesis lipoprotein
SCNpilot_expt_500_p_scaffold_1882_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3794..4657)
DNA (864bp) protein (288aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase FolD; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=FOLD_PARUW
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1882_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

4707..5153
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80583.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1882_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

5257..5919
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KXF0_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80584.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1882_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(5957..7216)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MAH6_PARUW
Replication-associated recombination protein A {ECO:0000313|EMBL:CDZ80585.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
recombination factor protein RarA; K07478 putative ATPase
SCNpilot_expt_500_p_scaffold_1882_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7225..7734)
DNA (510bp) protein (170aa)
Putative mreD n=2 Tax=Waddlia chondrophila RepID=D6YWL7_WADCW
Rod shape-determining protein MreD {ECO:0000313|EMBL:CDZ80586.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
mreD; mreD
SCNpilot_expt_500_p_scaffold_1882_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7748..8428)
DNA (681bp) protein (227aa)
Exopolysaccharide production protein ExoY n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0X0_PARAV
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase {ECO:0000313|EMBL:CDZ80587.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
exoY; exopolysaccharide production protein ExoY
SCNpilot_expt_500_p_scaffold_1882_11
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

8730..9608
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80588.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1882_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(9646..10188)
DNA (543bp) protein (181aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80589.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1882_13
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10196..11050)
DNA (855bp) protein (285aa)
gGPS1; geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4S3_9CHLA
Farnesyl diphosphate synthase {ECO:0000313|EMBL:CDZ80590.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1882_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(11054..12424)
DNA (1371bp) protein (457aa)
udg; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
UDP-glucose 6-dehydrogenase n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0W8_PARAV
UDP-glucose 6-dehydrogenase TuaD {ECO:0000313|EMBL:CDZ80591.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_1882_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12834..14036)
DNA (1203bp) protein (401aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WT0_SOLUE rbh
Glutathione-independent formaldehyde dehydrogenase {ECO:0000313|EMBL:CDZ80592.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
alcohol dehydrogenase rbh
Displaying 15 items

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