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SCNpilot_expt_500_p_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_128_1
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2..889
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L189_PARAV
Cell wall-associated polypeptide CWBP200 {ECO:0000313|EMBL:CDZ80234.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_2
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

889..1437
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L574_SIMNZ
Uncharacterized protein {ECO:0000313|EMBL:CDZ80233.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_3
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

1616..2158
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L574_SIMNZ
Uncharacterized protein {ECO:0000313|EMBL:CDZ80232.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_4
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2333..2554
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80231.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

2541..2828
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80230.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_6
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

3049..3579
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L574_SIMNZ
Uncharacterized protein {ECO:0000313|EMBL:CDZ80229.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_7
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3704..4042)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80228.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_8
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4138..4743)
DNA (606bp) protein (202aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2DTA9_TRIVA
Ankyrin repeat protein {ECO:0000313|EMBL:CDZ80227.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ankyrin repeat protein
SCNpilot_expt_500_p_scaffold_128_9
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4740..5165)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80226.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_10
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(5196..5909)
DNA (714bp) protein (238aa)
Uncharacterized protein n=5 Tax=Legionella pneumophila RepID=Q5X184_LEGPA
Glutamine amidotransferase {ECO:0000313|EMBL:CDZ80225.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_11
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

5951..7225
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BAED
Uncharacterized protein {ECO:0000313|EMBL:CDZ80224.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
lipoprotein
SCNpilot_expt_500_p_scaffold_128_12
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

7315..8259
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KVT7_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CDZ80223.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_13
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8282..9502)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L2B8_PARAV
Inner membrane protein YbiR {ECO:0000313|EMBL:CDZ80222.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_14
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(9504..10718)
DNA (1215bp) protein (405aa)
Uncharacterized MFS-type transporter Rv2456c/MT2531 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L2B7_PARAV
Major facilitator superfamily transporter {ECO:0000313|EMBL:CDZ80221.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
MFS-type transporter
SCNpilot_expt_500_p_scaffold_128_15
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(10821..12782)
DNA (1962bp) protein (654aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8L1N8_PARAV rbh
SCNpilot_expt_500_p_scaffold_128_16
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12831..13466)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6M9Z0_PARUW
Outer membrane protein W {ECO:0000313|EMBL:CDZ80219.1}; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_17
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

13804..15078
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L708_SIMNZ rbh
Proline porter II {ECO:0000313|EMBL:CDZ80218.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_128_18
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15065..15844
DNA (780bp) protein (260aa)
Mitochondrial carrier protein {ECO:0000313|EMBL:CDZ80217.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_19
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(15845..16666)
DNA (822bp) protein (274aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80216.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_20
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(16811..17377)
DNA (567bp) protein (189aa)
Pentapeptide repeats (8 copies) {ECO:0000313|EMBL:CDZ80215.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Pentapeptide repeat protein id=2825395 bin=GWA1_Treponema_62_8 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
pentapeptide repeat-containing protein
SCNpilot_expt_500_p_scaffold_128_21
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

17399..17878
DNA (480bp) protein (160aa)
Bacterial transcription activator, effector binding domain {ECO:0000313|EMBL:CDZ80214.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Transcription activator effector binding id=1875075 bin=GWE2_Gammaproteobacteria_42_36 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
transcription activator effector-binding protein
SCNpilot_expt_500_p_scaffold_128_22
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

17865..18401
DNA (537bp) protein (179aa)
aroE; shikimate biosynthesis protein AroDE; K13832 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RA78_9CHLA id=12317 bin=ACD17 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
Uncharacterized protein {ECO:0000313|EMBL:CDZ80213.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_23
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18401..19228
DNA (828bp) protein (276aa)
Streptomycin 6-kinase n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4ULE8_RICFE
Aminoglycoside/hydroxyurea antibiotic resistance kinase {ECO:0000313|EMBL:CDZ80212.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
streptomycin 6-kinase
SCNpilot_expt_500_p_scaffold_128_24
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

19263..19808
DNA (546bp) protein (182aa)
Non-canonical purine NTP phosphatase {ECO:0000313|EMBL:CDZ80211.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
Putative uncharacterized protein id=3688777 bin=PER_GWC2_41_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
SCNpilot_expt_500_p_scaffold_128_25
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(19792..20310)
DNA (519bp) protein (173aa)
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] n=2 Tax=Parachlamydia acanthamoebae RepID=F8KW85_PARAV
HIT domain protein {ECO:0000313|EMBL:CDZ80210.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
aph1; bis(5'-nucleosyl)-tetraphosphatase; K02503 Hit-like protein involved in cell-cycle regulation
SCNpilot_expt_500_p_scaffold_128_26
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20442..21011
DNA (570bp) protein (190aa)
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9G2_SIMNZ
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:CDZ80209.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_27
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(21030..21587)
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ80208.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
SCNpilot_expt_500_p_scaffold_128_28
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(21667..22725)
DNA (1059bp) protein (353aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:CDR34578.1}; EC=1.1.1.2 {ECO:0000313|EMBL:CDR34578.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
mannitol dehydrogenase (EC:1.1.1.255) rbh
Mannitol dehydrogenase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VYT5_9CYAN rbh
SCNpilot_expt_500_p_scaffold_128_29
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22773..23504
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KX61_PARAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB85528.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
SCNpilot_expt_500_p_scaffold_128_30
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

23501..24781
DNA (1281bp) protein (427aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KXH6_PARAV rbh
Displaying items 1-30 of 129 in total

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