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SCNpilot_expt_500_p_scaffold_48

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Displaying items 1-30 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_48_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..690
DNA (690bp) protein (230aa)
heat-shock protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F49D58
Stenotrophomonas maltophilia strain ZBG7B contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86582.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative protease
SCNpilot_expt_500_p_scaffold_48_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

788..1147
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F97FC9
Uncharacterized protein {ECO:0000313|EMBL:AHY60653.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_48_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1155..1652
DNA (498bp) protein (166aa)
Membrane protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KCC0_STEMA
Membrane protein {ECO:0000313|EMBL:EQM72384.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_48_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1649..2086
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D783BA
hypothetical protein
Protein sip-5 {ECO:0000313|EMBL:CCP14329.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
SCNpilot_expt_500_p_scaffold_48_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2134..3228
DNA (1095bp) protein (365aa)
transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003667326 rbh
Transporter {ECO:0000313|EMBL:AJC47703.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_48_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3267..3995
DNA (729bp) protein (243aa)
haloacid dehalogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E094AD rbh
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily rbh
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACF49967.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_expt_500_p_scaffold_48_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4009..5376
DNA (1368bp) protein (456aa)
putative leucine aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Peptidase B n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3F0M2_STEMA rbh
SCNpilot_expt_500_p_scaffold_48_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5518..6624
DNA (1107bp) protein (369aa)
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
catalase related subgroup domain-containing protein; K03781 catalase [EC:1.11.1.6] rbh
Catalase-related peroxidase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9X7_9GAMM rbh
SCNpilot_expt_500_p_scaffold_48_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6621..7157
DNA (537bp) protein (179aa)
Cytochrome B561 n=2 Tax=Stenotrophomonas maltophilia RepID=B4STC1_STRM5 rbh
cytochrome B561 rbh
Cytochrome b561 {ECO:0000313|EMBL:AEM49621.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_expt_500_p_scaffold_48_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7197..7799)
DNA (603bp) protein (201aa)
Two component LuxR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS1_9GAMM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AGG88220.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_48_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7796..8986)
DNA (1191bp) protein (397aa)
Two-component sensor histidine kinase; K07778 two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] rbh
sensor histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037E8387 rbh
Histidine kinase {ECO:0000313|EMBL:AHY60664.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_expt_500_p_scaffold_48_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9023..9811)
DNA (789bp) protein (263aa)
ABC transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E5_9GAMM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, permease component
SCNpilot_expt_500_p_scaffold_48_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9811..10737)
DNA (927bp) protein (309aa)
Putative ATP binding component of ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WNR8_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG88217.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_p_scaffold_48_14
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10941..12191
DNA (1251bp) protein (417aa)
Membrane fusion protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9Y3_9GAMM rbh
RND family efflux transporter MFP subunit rbh
Membrane fusion protein {ECO:0000313|EMBL:EED40363.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_expt_500_p_scaffold_48_15
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13166..13852
DNA (687bp) protein (229aa)
ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037A1337 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKC87057.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
putative ATP-binding component of ABC transporter; K02003 putative ABC transport system ATP-binding protein rbh
SCNpilot_expt_500_p_scaffold_48_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13935..15095
DNA (1161bp) protein (387aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003199F2D rbh
putative transmembrane permease; K02004 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78665.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_expt_500_p_scaffold_48_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15106..16587
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5C5_STEMA rbh
hypothetical protein; K02004 putative ABC transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEM49613.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_expt_500_p_scaffold_48_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16825..19680
DNA (2856bp) protein (952aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000309B383 rbh
Vitamin B12 transporter btuB {ECO:0000313|EMBL:EZP42970.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative TonB dependent receptor protein rbh
SCNpilot_expt_500_p_scaffold_48_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19858..20985
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UU22_PSEUP rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:AKC87054.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_48_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21029..21940)
DNA (912bp) protein (304aa)
Membrane protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KKS9_STEMA rbh
Membrane protein {ECO:0000313|EMBL:EQM79189.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
RarD protein, DMT superfamily transporter; K05786 chloramphenicol-sensitive protein RarD rbh
SCNpilot_expt_500_p_scaffold_48_21
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21937..22836)
DNA (900bp) protein (300aa)
Uncharacterized inner membrane transporter YedA n=3 Tax=Xanthomonas RepID=H1XFE3_9XANT rbh
Membrane protein {ECO:0000313|EMBL:KHL59815.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_48_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23201..24853)
DNA (1653bp) protein (551aa)
Peptidase M20 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KA11_STEMA rbh
Stenotrophomonas maltophilia strain ZBG7B contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86562.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
peptidase M28 rbh
SCNpilot_expt_500_p_scaffold_48_23
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24938..25936)
DNA (999bp) protein (333aa)
beta-lactamase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A59C rbh
Beta-lactamase {ECO:0000313|EMBL:AJC46279.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
metallo-beta-lactamase rbh
SCNpilot_expt_500_p_scaffold_48_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26052..26351)
DNA (300bp) protein (100aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F373FA
Stenotrophomonas maltophilia strain ZBG7B contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86560.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative transmembrane protein
SCNpilot_expt_500_p_scaffold_48_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26419..27792)
DNA (1374bp) protein (458aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] rbh
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
tryptophanyl-tRNA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030EE6CA rbh
SCNpilot_expt_500_p_scaffold_48_26
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27821..28603
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003120BD1
Uncharacterized protein {ECO:0000313|EMBL:AHY60681.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_48_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28676..28897)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A5070
yjbJ; Protein YjbJ
UPF0337 protein {ECO:0000313|EMBL:EJP78648.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_expt_500_p_scaffold_48_28
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29090..29224)
DNA (135bp) protein (45aa)
Entericidin EcnAB n=2 Tax=Stenotrophomonas maltophilia RepID=G0K5B2_STEMA
Entericidin {ECO:0000313|EMBL:AHY60683.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ecnA; hypothetical protein
SCNpilot_expt_500_p_scaffold_48_29
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29292..29444)
DNA (153bp) protein (51aa)
entericidin n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039C3D74
Entericidin {ECO:0000313|EMBL:AKC87153.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
entericidin ecnab precursor
SCNpilot_expt_500_p_scaffold_48_30
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29572..30492)
DNA (921bp) protein (307aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
arginase (EC:3.5.3.1); K01476 arginase [EC:3.5.3.1] rbh
arginase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F8A4B5 rbh
Displaying items 1-30 of 167 in total

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