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SCNpilot_expt_500_p_scaffold_87

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Displaying items 1-30 of 146 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_87_1
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(364..1800)
DNA (1437bp) protein (479aa)
2-oxoglutarate translocator n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B92D rbh
2-oxoglutarate translocator {ECO:0000313|EMBL:AIK96149.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
yflS; hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_87_2
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2019..5117
DNA (3099bp) protein (1033aa)
Putative uncharacterized protein n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GUT5_RICB8
Uncharacterized protein {ECO:0000313|EMBL:KJV90320.1}; TaxID=1359193 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" source="Rickettsia bellii str. RML An4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_87_3
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5134..5958)
DNA (825bp) protein (275aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000255|HAMAP-Rule:MF_00056}; EC=2.5.1.55 {ECO:0000255|HAMAP-Rule:MF_00056};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00056}; Short=KDO 8-P synthase {ECO:0000255|HAMAP-Rule:MF_00056};; Short=KDOPS {ECO:0000255|HAMAP-Rule:MF_00056};; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000255|HAMAP-Rule:MF_00056}; TaxID=391896 species="Bacteria; Proteobacteria; Alpha
2-dehydro-3-deoxyphosphooctonate aldolase n=2 Tax=Rickettsia bellii RepID=KDSA_RICB8 rbh
SCNpilot_expt_500_p_scaffold_87_4
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5968..7602)
DNA (1635bp) protein (545aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2]
CTP synthetase n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000367B80A
SCNpilot_expt_500_p_scaffold_87_5
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7608..7913)
DNA (306bp) protein (102aa)
UPI00002608CF related cluster n=1 Tax=unknown RepID=UPI00002608CF
Preprotein translocase subunit SecG {ECO:0000313|EMBL:AIL64851.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
protein translocase subunit secG
SCNpilot_expt_500_p_scaffold_87_6
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(7923..8606)
DNA (684bp) protein (228aa)
Triosephosphate isomerase id=4569550 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
triosephosphate isomerase
Tax=GWF2_RIF_IGX_33_9_curated
SCNpilot_expt_500_p_scaffold_87_7
Rickettsia bellii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8750..11020
DNA (2271bp) protein (757aa)
Putative uncharacterized protein n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GUT5_RICB8
Uncharacterized protein {ECO:0000313|EMBL:KJV90320.1}; TaxID=1359193 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group.;" source="Rickettsia bellii str. RML An4.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_87_8
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11061..12326)
DNA (1266bp) protein (422aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV61_PARL1
Transcriptional regulatory protein ZraR {ECO:0000313|EMBL:KKB96201.1}; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
two component sigma-54 specific Fis family transcriptional regulator
SCNpilot_expt_500_p_scaffold_87_9
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12329..13123)
DNA (795bp) protein (265aa)
Chemotaxis protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MHF2_9PROT
pomA; chemotaxis protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCNpilot_expt_500_p_scaffold_87_10
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13125..13409)
DNA (285bp) protein (95aa)
Flagellar motor switch protein FliN n=2 Tax=Candidatus Midichloria mitochondrii RepID=F7XVL9_MIDMI
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AIL65425.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
fliN; flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
SCNpilot_expt_500_p_scaffold_87_11
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

13662..15725
DNA (2064bp) protein (688aa)
viral A-type inclusion protein; K02331 DNA polymerase phi subunit [EC:2.7.7.7]
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2FSZ8_TRIVA
Viral A-type inclusion protein, putative {ECO:0000313|EMBL:EAX91963.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
SCNpilot_expt_500_p_scaffold_87_12
unknown

Not on your lists

15764..17341
DNA (1578bp) protein (526aa)
Chromosome undetermined scaffold_38, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D4Y2_PARTE
hypothetical protein; K11675 Ino eighty subunit 1
SCNpilot_expt_500_p_scaffold_87_13
Plasmodium vinckei, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

17369..19225
DNA (1857bp) protein (619aa)
Actinin, putative n=2 Tax=Trichomonas vaginalis RepID=A2DKT4_TRIVA
Uncharacterized protein {ECO:0000313|EMBL:EUD71587.1}; TaxID=138298 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).;" source="Plasmodium vinckei petteri.;"
actinin
SCNpilot_expt_500_p_scaffold_87_14
Setaria italica, Setaria, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

19337..22510
DNA (3174bp) protein (1058aa)
Uncharacterized protein n=2 Tax=Setaria italica RepID=K3YP83_SETIT
flagellar attachment zone protein 1-like
Uncharacterized protein {ECO:0000313|EnsemblPlants:Si016075m}; TaxID=4555 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Paniceae; Setaria.;" source="Setaria italica (Foxtail millet) (Panicum italicum).;"
SCNpilot_expt_500_p_scaffold_87_15
Ehrlichia canis, Ehrlichia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22497..23054)
DNA (558bp) protein (186aa)
Exopolysaccharide synthesis, ExoD n=1 Tax=Ehrlichia canis (strain Jake) RepID=Q3YSF4_EHRCJ
exopolysaccharide synthesis, ExoD
Exopolysaccharide synthesis, ExoD {ECO:0000313|EMBL:AAZ68351.1}; TaxID=269484 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia.;" source="Ehrlichia canis (strain Jake).;"
SCNpilot_expt_500_p_scaffold_87_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23060..23233)
DNA (174bp) protein (58aa)
Sec-independent protein translocase protein TatA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQT0_AZOBR
tatA; sec-independent protein translocase protein tatA/E homolog
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_500_p_scaffold_87_17
unknown

Not on your lists

23335..23697
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_87_18
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23756..25144
DNA (1389bp) protein (463aa)
Amino acid permease-associated region n=1 Tax=Thermosinus carboxydivorans Nor1 PF8_9FIRM">RepID=A1HPF8_9FIRM
Amino acid permease-associated region {ECO:0000313|EMBL:EAX48260.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
atrC1; cationic amino acid transporter-1; K03294 basic amino acid/polyamine antiporter, APA family rbh
SCNpilot_expt_500_p_scaffold_87_19
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25151..26569
DNA (1419bp) protein (473aa)
Amino acid permease-associated region n=1 Tax=Thermosinus carboxydivorans Nor1 PF8_9FIRM">RepID=A1HPF8_9FIRM
Amino acid permease-associated region {ECO:0000313|EMBL:EAX48260.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
amino acid permease-associated region; K03294 basic amino acid/polyamine antiporter, APA family
SCNpilot_expt_500_p_scaffold_87_20
Wolbachia endosymbiont of Drosophila simulans, Wolbachia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26559..27815
DNA (1257bp) protein (419aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1236908 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia.;" source="Wolbachia endosymbiont of Drosophila simulans wNo.;"
Histidine--tRNA ligase n=1 Tax=Wolbachia endosymbiont of Drosophila simulans wNo RepID=M9WNW4_9RICK rbh
hisS; Histidyl-tRNA synthetase rbh
SCNpilot_expt_500_p_scaffold_87_21
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27838..28929
DNA (1092bp) protein (364aa)
Peptide chain release factor 1 n=1 Tax=Wolbachia endosymbiont of Drosophila simulans wNo RepID=M9WXR8_9RICK rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
prfA; Peptide chain release factor 1 rbh
SCNpilot_expt_500_p_scaffold_87_22
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28949..29797
DNA (849bp) protein (283aa)
bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase (EC:2.1.1.33); K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI00035C6246
Tax=CG_Alphaprot_01
SCNpilot_expt_500_p_scaffold_87_23
alpha proteobacterium HIMB114, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29812..30228
DNA (417bp) protein (139aa)
UPI0003C7FE18 related cluster n=1 Tax=unknown RepID=UPI0003C7FE18
Uncharacterized protein {ECO:0000313|EMBL:EMH80528.1}; TaxID=684719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae.;" source="alpha proteobacterium HIMB114.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_87_24
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30275..31654
DNA (1380bp) protein (460aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=86106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC8.;"
Fumarate hydratase class II (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VI77_9PROT
SCNpilot_expt_500_p_scaffold_87_25
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(31686..31955)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000345D927
Translation repressor RelE {ECO:0000313|EMBL:KIE10634.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
addiction module antitoxin; K06218 RelE protein
SCNpilot_expt_500_p_scaffold_87_26
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32012..32227)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ERA0_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30213.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
DNA-binding domain-containing protein
SCNpilot_expt_500_p_scaffold_87_27
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32542..33645)
DNA (1104bp) protein (368aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000367363F
SCNpilot_expt_500_p_scaffold_87_28
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33642..34787)
DNA (1146bp) protein (382aa)
Cell division protein ftsW n=1 Tax=Rickettsia bellii (strain OSU 85-389) RepID=A8GVJ6_RICB8 rbh
Cell division protein FtsW {ECO:0000313|EMBL:AIL64465.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
cell division protein ftsW; K03588 cell division protein FtsW rbh
SCNpilot_expt_500_p_scaffold_87_29
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34804..35793)
DNA (990bp) protein (330aa)
Fructose-1,6-bisphosphatase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LN89_9PROT
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
ywjI; fructose 1,6-bisphosphatase II
SCNpilot_expt_500_p_scaffold_87_30
unknown

Not on your lists

comp(35899..36585)
DNA (687bp) protein (229aa)

This feature has no annotations

Displaying items 1-30 of 146 in total

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