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SCNpilot_expt_500_p_scaffold_159

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_159_1
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121..2115)
DNA (1995bp) protein (665aa)
DNA gyrase subunit B {ECO:0000313|EMBL:KKB96099.1}; EC=5.99.1.3 {ECO:0000313|EMBL:KKB96099.1};; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
parE; DNA topoisomerase IV subunit B; K02622 topoisomerase IV subunit B [EC:5.99.1.-] rbh
DNA topoisomerase 4 subunit B n=1 Tax=Rickettsia bellii (strain RML369-C) RepID=PARE_RICBR rbh
SCNpilot_expt_500_p_scaffold_159_2
Candidatus Pelagibacter sp. HTCC7211, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2108..2464)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Pelagibacter ubique RepID=UPI0003B75FA4
Cytochrome c biogenesis family protein {ECO:0000313|EMBL:EDZ60484.1}; TaxID=439493 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae; Candidatus Pelagibacter.;" source="Candidatus Pelagibacter sp. HTCC7211.;"
nrfF; formate-dependent nitrite reductase complex subunit NrfF; K04017 formate-dependent nitrite reductase complex subunit NrfF
SCNpilot_expt_500_p_scaffold_159_3
unknown

Not on your lists

comp(2418..2903)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_159_4
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2878..3846)
DNA (969bp) protein (323aa)
Oxidoreductase, aldo/keto reductase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V3X3_9MICC
Oxidoreductase {ECO:0000313|EMBL:GAK91051.1}; TaxID=906888 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ulvanivorans.;"
oxidoreductase, aldo/keto reductase
SCNpilot_expt_500_p_scaffold_159_5
unknown

Not on your lists

comp(3836..4912)
DNA (1077bp) protein (359aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_159_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4903..5535)
DNA (633bp) protein (211aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Guanylate kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV41_AZOS1
SCNpilot_expt_500_p_scaffold_159_7
Ehrlichia mineirensis, Ehrlichia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5538..6467)
DNA (930bp) protein (310aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000313|EMBL:CEI85504.1};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1242993 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia.;" source="Ehrlichia mineirensis.;"
Acetylglutamate kinase n=1 Tax=Ehrlichia canis (strain Jake) RepID=ARGB_EHRCJ
SCNpilot_expt_500_p_scaffold_159_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6430..7065)
DNA (636bp) protein (212aa)
Probable GTP-binding protein EngB n=1 Tax=Oceanibaculum indicum P24 RepID=K2K614_9PROT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative GTP-binding protein; K03978 GTP-binding protein
SCNpilot_expt_500_p_scaffold_159_9
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7065..8717)
DNA (1653bp) protein (551aa)
Membrane protein insertase YidC n=1 Tax=Rickettsia canadensis str. CA410 RepID=H6PDI1_RICCA
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
membrane protein insertase; K03217 preprotein translocase subunit YidC
SCNpilot_expt_500_p_scaffold_159_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8692..8850)
DNA (159bp) protein (53aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Staphylococcus aureus M0239 RepID=N5I6R7_STAAU
putative membrane protein insertion efficiency factor
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
SCNpilot_expt_500_p_scaffold_159_11
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8954..9289)
DNA (336bp) protein (112aa)
Tax=BJP_IG2102_Syntrophobacterales_60_12
SCNpilot_expt_500_p_scaffold_159_12
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9282..9416)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RL34_GRABC
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_expt_500_p_scaffold_159_13
endosymbiont of Acanthamoeba sp. UWC8, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9585..11345
DNA (1761bp) protein (587aa)
Poly(3-hydroxyalkanoate) synthetase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LFV5_9PROT
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:AIF81213.1}; TaxID=86106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC8.;"
SCNpilot_expt_500_p_scaffold_159_14
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11345..11929
DNA (585bp) protein (195aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VJI8_9PROT
Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_expt_500_p_scaffold_159_15
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11944..12732
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI0003719A8F
Osmotically-inducible protein Y {ECO:0000313|EMBL:AIL65062.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
putative osmotically inducible protein
SCNpilot_expt_500_p_scaffold_159_16
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12779..13666
DNA (888bp) protein (296aa)
gshB; glutathione synthase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3]
Glutathione synthetase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYG8_AZOS1
Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
SCNpilot_expt_500_p_scaffold_159_17
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

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comp(13663..15282)
DNA (1620bp) protein (540aa)
GATA zinc finger domain-containing protein 14 n=1 Tax=Dictyostelium discoideum RepID=GTAN_DICDI
gtaN; GATA zinc finger domain-containing protein 14
GATA zinc finger domain-containing protein 14; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
SCNpilot_expt_500_p_scaffold_159_18
unknown

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comp(15411..15932)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_159_19
R_Alphaproteobacteria_40_19, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16274..17248
DNA (975bp) protein (325aa)
NADPH:quinone reductase and related Zn-dependent oxidoreductase; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
NADPH:quinone reductase and related Zn-dependent oxidoreductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VYG6_MAGSA
Tax=RIFCSPLOWO2_02_FULL_Alphaproteobacteria_40_19_curated
SCNpilot_expt_500_p_scaffold_159_20
unknown

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17249..17617
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_159_21
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17696..18811
DNA (1116bp) protein (372aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC36.;"
mnmA; tRNA-specific 2-thiouridylase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] rbh
thiouridylase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B93F
SCNpilot_expt_500_p_scaffold_159_22
Carnobacterium sp. AT7, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19205..19999
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U7Q8_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EDP68520.1}; TaxID=333990 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. AT7.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_159_23
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20074..21888
DNA (1815bp) protein (605aa)
Sensory/regulatory protein RpfC {ECO:0000313|EMBL:AIL65834.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AIL65834.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
two-component sensor histidine kinase (EC:2.7.13.3); K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
Putative Sensory transduction histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3Q1_9PROT
SCNpilot_expt_500_p_scaffold_159_24
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21885..23216)
DNA (1332bp) protein (444aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:AKH99177.1}; EC=5.4.2.10 {ECO:0000313|EMBL:AKH99177.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQK2_9RHIZ
SCNpilot_expt_500_p_scaffold_159_25
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23364..25253)
DNA (1890bp) protein (630aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] rbh
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV07_PARL1 rbh
SCNpilot_expt_500_p_scaffold_159_26
Orientia chuto, Orientia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25364..26332)
DNA (969bp) protein (323aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1359168 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia.;" source="Orientia chuto str. Fuller.;"
mesJ; MesJ protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI00037843C4
SCNpilot_expt_500_p_scaffold_159_27
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26378..27388)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LQY7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF07292.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_159_28
unknown

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comp(27493..27858)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_159_29
unknown

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comp(27848..28126)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_159_30
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(28142..28603)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8X0_METEZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73791.1}; Flags: Precursor;; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
Displaying items 1-30 of 101 in total

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